RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CD3EP07766 207 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 CDH2P19022 906 aaPredicted RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 GGT1P19440 569 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 CBLP22681 906 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 GTF2E2P29084 291 aaKnown RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 MRPL19P49406 292 aaKnown RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 ATP4BP51164 291 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 MTPNP58546 118 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 NCALDP61601 193 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 CDK6Q00534 326 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 IL1RL1Q01638 556 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 BSPH1Q075Z2 132 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 SCARB2Q14108 478 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 SELPLGQ14242 412 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 P2RY6Q15077 328 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 PPA1Q15181 289 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 CYP51A1Q16850 503 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 GLIPR1L2Q4G1C9 344 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 REEP3Q6NUK4 255 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 Q71RC1 249 aaPredicted RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 COMTD1Q86VU5 262 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 PMM1Q92871 262 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 PIGTQ969N2 578 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 SLC25A36Q96CQ1 311 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 Q96MF0 132 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 SMR3AQ99954 134 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 CPPED1Q9BRF8 314 aaPredicted RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 PRR14Q9BWN1 585 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 TMEM120AQ9BXJ8 343 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 HDHD5Q9BXW7 423 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 ADAM19Q9H013 955 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 OR10A4Q9H209 315 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 GSX1Q9H4S2 264 aaPredicted RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 ESRP2Q9H6T0 727 aaKnown RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 LEF1Q9UJU2 399 aaPredicted RBP8.55□□□□□ -1.04
USP54-207ENST00000451492 LAMP3Q9UQV4 416 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 RNF115Q9Y4L5 304 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 FLVCR1Q9Y5Y0 555 aa8.55□□□□□ -1.04
USP54-207ENST00000451492 IGKV3D-15A0A087WSY6 115 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 A0A1W2PP18 115 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 LIPT2A6NK58 231 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 ELOA3DA6NLF2 546 aaPredicted RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 A8MVM7 634 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 M0R1B8 84 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 GPR171O14626 319 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 HS3ST1O14792 307 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 DNPH1O43598 174 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 TPST1O60507 370 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 EIF1BO60739 113 aaKnown RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 COX5AP20674 150 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 PPIBP23284 216 aaKnown RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 SLC6A2P23975 617 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 FKBP2P26885 142 aaKnown RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 NTF4P34130 210 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 CLK1P49759 484 aaKnown RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 ZNF83P51522 516 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 SPOCK1Q08629 439 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 NFYCQ13952 458 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 ELOA3BQ3SY89 546 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 NCMAPQ5T1S8 102 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 C1orf140Q5VVS0 124 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 PRAMEF8Q5VWM4 474 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 PRAMEF7Q5VXH5 474 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 FBXW9Q5XUX1 488 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 AP1ARQ63HQ0 302 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 YTHDF3Q7Z739 585 aaKnown RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 RETREG3Q86VR2 466 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 KRT73Q86Y46 540 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 PIAS4Q8N2W9 510 aaPredicted RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 ZNF433Q8N7K0 673 aaPredicted RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 SMYD1Q8NB12 490 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 ELOA3Q8NG57 546 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 TMEM171Q8WVE6 324 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 HSD17B8Q92506 261 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 FBXW5Q969U6 566 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 MUCL1Q96DR8 90 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 C1QTNF6Q9BXI9 259 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 RSPO3Q9BXY4 272 aaPredicted RBP8.54□□□□□ -1.04
USP54-207ENST00000451492 RABEP2Q9H5N1 569 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 PIF1Q9H611 641 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 NGBQ9NPG2 151 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 SLC52A3Q9NQ40 469 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 ASB6Q9NWX5 421 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 NPAP1Q9NZP6 1156 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 SEC14L4Q9UDX3 406 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 SLC13A4Q9UKG4 626 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 TRIM33Q9UPN9 1127 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 CORO2BQ9UQ03 480 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 ANGPT4Q9Y264 503 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 TRAPPC4Q9Y296 219 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 SLC9A8Q9Y2E8 581 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 NDUFAF1Q9Y375 327 aa8.54□□□□□ -1.04
USP54-207ENST00000451492 TRBV5-3A0A0A0MS03 114 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 DPRXA6NFQ7 191 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 AQP7P3A6NL99 342 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 TMEM229AB2RXF0 380 aa8.53□□□□□ -1.04
USP54-207ENST00000451492 M0R3H8 397 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms