RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TRILQ7L0X0 811 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 ATG16L2Q8NAA4 619 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 GNPDA2Q8TDQ7 276 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 DNAJC9Q8WXX5 260 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 SGTBQ96EQ0 304 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 WBP1Q96G27 269 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 ARL5BQ96KC2 179 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 GPA33Q99795 319 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 DEFB127Q9H1M4 99 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 VCX3BQ9H321 246 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 TMEM185BQ9H7F4 350 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 KIF17Q9P2E2 1029 aa12.66□□□□□ -0.38
SHMT2-203ENST00000449049 TMEFF2Q9UIK5 374 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-203ENST00000449049 HCN1O60741 890 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 FZD7O75084 574 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 AHSA1O95433 338 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 GPR4P46093 362 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 ZNF74Q16587 644 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 C1QL3Q5VWW1 255 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 CD300LDQ6UXZ3 194 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 SLC46A3Q7Z3Q1 461 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 MEX3DQ86XN8 651 aaKnown RBP12.65□□□□□ -0.38
SHMT2-203ENST00000449049 CDK20Q8IZL9 346 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 ATP6V1C2Q8NEY4 427 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 MAGEE2Q8TD90 523 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-203ENST00000449049 LIPHQ8WWY8 451 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 TAAR8Q969N4 342 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 HDGFL3Q9Y3E1 203 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 TRGV5A0A0B4J1U4 118 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 A0A1B0GVC2 190 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 GJE1A6NN92 205 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 FTCDNL1E5RQL4 147 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 CDC42EP2O14613 210 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 ACTL6AO96019 429 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 BGLAPP02818 100 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 RPS5P46782 204 aaKnown RBP12.65□□□□□ -0.38
SHMT2-203ENST00000449049 LTBQ06643 244 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 TSPAN31Q12999 210 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 C1QTNF12Q5T7M4 302 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 FAM69AQ5T7M9 428 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 GGNQ86UU5 652 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 GTPBP3Q969Y2 492 aaKnown RBP12.65□□□□□ -0.38
SHMT2-203ENST00000449049 ZNF556Q9HAH1 456 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 POFUT2Q9Y2G5 429 aa12.65□□□□□ -0.38
SHMT2-203ENST00000449049 MGAQ8IWI9 3026 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 OR2T1O43869 369 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 OR7A10O76100 309 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 CH25HO95992 272 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 MT-ATP6P00846 226 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 TFPIP10646 304 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 IMPDH2P12268 514 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 POU2F1P14859 743 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 BMP7P18075 431 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-203ENST00000449049 GSTM3P21266 225 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 IGFBP5P24593 272 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 SFTPDP35247 375 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 IDUAP35475 653 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 VHLP40337 213 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 LHX2P50458 406 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 COX10Q12887 443 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 KLRB1Q12918 225 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 MYBPHQ13203 477 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 BCL2A1Q16548 175 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 TMEM176BQ3YBM2 270 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-203ENST00000449049 FAM180AQ6UWF9 173 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 TEX19Q8NA77 164 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 DRAXINQ8NBI3 349 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-203ENST00000449049 MFSD8Q8NHS3 518 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 KLHL15Q96M94 604 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 MOGAT1Q96PD6 335 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 TSC22D3Q99576 134 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 TSPAN10Q9H1Z9 355 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-203ENST00000449049 VCXQ9H320 206 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 LDAHQ9H6V9 325 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 FKRPQ9H9S5 495 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 KRT84Q9NSB2 600 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 EFCAB9A8MZ26 197 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 LRRN3E7EW58 273 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 OPN1LWP04000 364 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 ACADSP16219 412 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 SLC9A3P48764 834 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 C19orf57Q0VDD7 668 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 CTU2Q2VPK5 515 aaKnown RBP12.64□□□□□ -0.39
SHMT2-203ENST00000449049 ZNF324BQ6AW86 544 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-203ENST00000449049 VASNQ6EMK4 673 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 KLHL17Q6TDP4 642 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 GALNT4Q8N4A0 578 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 ABTB1Q969K4 478 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-203ENST00000449049 MIB2Q96AX9 1013 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 ADGRG7Q96K78 797 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 OR5B2Q96R09 309 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 UCK2Q9BZX2 261 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 PAPOLBQ9NRJ5 636 aaKnown RBP12.64□□□□□ -0.39
SHMT2-203ENST00000449049 SPRR3Q9UBC9 169 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 ZNF229Q9UJW7 825 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 TRAPPC4Q9Y296 219 aa12.64□□□□□ -0.39
SHMT2-203ENST00000449049 ANKRD11Q6UB99 2663 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms