RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TESQ9UGI8 421 aaKnown RBP12.99□□□□□ -0.33
USP39-206ENST00000448971 HDGFL3Q9Y3E1 203 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 HEATR5AQ86XA9 2040 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 TLN2Q9Y4G6 2542 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 TUBAL3A6NHL2 446 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 A6NNC1 897 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 A8MXE2 369 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 AIM2O14862 343 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 SMAD9O15198 467 aaKnown RBP12.98□□□□□ -0.33
USP39-206ENST00000448971 ZNF208O43345 1280 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 PRKD3O94806 890 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 PMS2P2O95744 297 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 CD8BP10966 210 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 POU2F1P14859 743 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 PCBP3P57721 371 aaKnown RBP12.98□□□□□ -0.33
USP39-206ENST00000448971 DAZAP2Q15038 168 aaPredicted RBP12.98□□□□□ -0.33
USP39-206ENST00000448971 EXOC3L2Q2M3D2 409 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 VMACQ2NL98 169 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 GLIPR1L2Q4G1C9 344 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 ARPINQ7Z6K5 226 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 PATL1Q86TB9 770 aaKnown RBP12.98□□□□□ -0.33
USP39-206ENST00000448971 STK32CQ86UX6 486 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 SLC43A2Q8N370 569 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 ARID1AO14497 2285 aa12.98□□□□□ -0.33
USP39-206ENST00000448971 FAM220BPB1ANY3 271 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 TPST1O60507 370 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 IDUAP35475 653 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 CLK1P49759 484 aaKnown RBP12.97□□□□□ -0.33
USP39-206ENST00000448971 NUDT2P50583 147 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 MAP2K6P52564 334 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 OR2B6P58173 313 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 DMTNQ08495 405 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 ABLIM2Q6H8Q1 611 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 ERICH5Q6P6B1 374 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 COMTD1Q86VU5 262 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 RANBP3LQ86VV4 465 aaPredicted RBP12.97□□□□□ -0.33
USP39-206ENST00000448971 TUSC5Q8IXB3 177 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 OR52E4Q8NGH9 312 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 RNF217Q8TC41 542 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 FAM222BQ8WU58 562 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 C3orf49Q96BT1 292 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 PSD2Q9BQI7 771 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 TACO1Q9BSH4 297 aaKnown RBP12.97□□□□□ -0.33
USP39-206ENST00000448971 SELENONQ9NZV5 590 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 TMEM181Q9P2C4 612 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 EDARQ9UNE0 448 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 FBN3Q75N90 2809 aa12.97□□□□□ -0.33
USP39-206ENST00000448971 ZC3H12DA2A288 527 aaKnown RBP12.96□□□□□ -0.33
USP39-206ENST00000448971 ELOA3DA6NLF2 546 aaPredicted RBP12.96□□□□□ -0.33
USP39-206ENST00000448971 M0R3H8 397 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 DNPH1O43598 174 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 CYTIPO60759 359 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 MFN2O95140 757 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 CGAP01215 116 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 CD79BP40259 229 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 RASGEF1BQ0VAM2 473 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 BNIP2Q12982 314 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 ELOA3BQ3SY89 546 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 ZNF474Q6S9Z5 364 aaPredicted RBP12.96□□□□□ -0.33
USP39-206ENST00000448971 TREML1Q86YW5 311 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 ZNF610Q8N9Z0 462 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 WFDC11Q8NEX6 87 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 ELOA3Q8NG57 546 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 OR2T12Q8NG77 320 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 VANGL1Q8TAA9 524 aaPredicted RBP12.96□□□□□ -0.33
USP39-206ENST00000448971 LINC01560Q8TB33 94 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 PIGXQ8TBF5 258 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 CMTM5Q96DZ9 223 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 ZNF300Q96RE9 604 aaPredicted RBP12.96□□□□□ -0.33
USP39-206ENST00000448971 SMR3AQ99954 134 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 TAPBPLQ9BX59 468 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 ADAM19Q9H013 955 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 GP6Q9HCN6 339 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 FANCFQ9NPI8 374 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 EMC3Q9P0I2 261 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 PRDM4Q9UKN5 801 aa12.96□□□□□ -0.33
USP39-206ENST00000448971 CSPG4Q6UVK1 2322 aa12.96□□□□□ -0.34
USP39-206ENST00000448971 MED12LQ86YW9 2145 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 A0A1B0GWA3 101 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 A8MVM7 634 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 M0QX08 132 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 AHSA1O95433 338 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 GPIP06744 558 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 YES1P07947 543 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 IMPDH2P12268 514 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 HTR2AP28223 471 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 GTF2E2P29084 291 aaKnown RBP12.95□□□□□ -0.34
USP39-206ENST00000448971 HOXC12P31275 282 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 CCKARP32238 428 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 GZMMP51124 257 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 SLC35A1P78382 337 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 LTBQ06643 244 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 FAM27E3Q08E93 113 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 OR7A5Q15622 319 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 LRRC23Q53EV4 343 aaPredicted RBP12.95□□□□□ -0.34
USP39-206ENST00000448971 ALG10BQ5I7T1 473 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 PAMR1Q6UXH9 720 aa12.95□□□□□ -0.34
USP39-206ENST00000448971 ATG4DQ86TL0 474 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms