RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 NMUR2Q9GZQ4 415 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 MUC13Q9H3R2 512 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 MYOTQ9UBF9 498 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 LRIT2A6NDA9 550 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 G3V2T6 193 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SHOXO15266 292 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CBFA2T3O75081 653 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 RAF1P04049 648 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ASCL1P50553 236 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 EDDM3BP56851 147 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 DUSP8Q13202 625 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TRAM2Q15035 370 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 BHLHA15Q7RTS1 189 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 MRPL41Q8IXM3 137 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CCDC120Q96HB5 630 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 APOL4Q9BPW4 351 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR51V1Q9H2C8 321 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 AKTIPQ9H8T0 292 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ACSS1Q9NUB1 689 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 MYO16Q9Y6X6 1858 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 MYL12BO14950 172 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TNFRSF1AP19438 455 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 DNAJB13P59910 316 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 RUNX1T1Q06455 604 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SELENBP1Q13228 472 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CLN3Q13286 438 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 C18orf63Q68DL7 685 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 C3orf33Q6P1S2 294 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR7A2PQ8NGA2 310 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR51G2Q8NGK0 314 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 NFKBIDQ8NI38 313 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC25A28Q96A46 364 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PCGF1Q9BSM1 259 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SYT11Q9BT88 431 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 C8orf4Q9NR00 106 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TUBD1Q9UJT1 453 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 RNF115Q9Y4L5 304 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 GPC6Q9Y625 555 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 NKX2-6A6NCS4 301 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CD33P20138 364 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 DAP3P51398 398 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CLDN17P56750 224 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CRYZQ08257 329 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 GRB7Q14451 532 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 LINC00471Q8N535 108 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TMEM185AQ8NFB2 350 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ROBO4Q8WZ75 1007 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 HINT2Q9BX68 163 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 METTL17Q9H7H0 456 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM60AQ9NP50 221 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 IGF2RP11717 2491 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A0G2JPF8 293 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 RAB19A4D1S5 217 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 HNRNPCL3B7ZW38 293 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TNFRSF11BO00300 401 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PAPLNO95428 1278 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 B3GALT4O96024 378 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 RLN1P04808 185 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CHRNGP07510 517 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 HNRNPCL4P0DMR1 293 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 YAP1P46937 504 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PNLIPRP2P54317 469 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 IZUMO1Q8IYV9 350 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF781Q8N8C0 355 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC38A5Q8WUX1 472 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 EBF2Q9HAK2 575 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF225Q9UK10 706 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PILRAQ9UKJ1 303 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ATG4BQ9Y4P1 393 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 LRRC37A2A6NM11 1700 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A1W2PRD5 423 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A1W2PRF3 423 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A1W2PRM7 423 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 EIF4E2O60573 245 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PROCP04070 461 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SHBGP04278 402 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 H1F0P07305 194 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM157BP0CG42 384 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CTSSP25774 331 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CDH12P55289 794 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PON3Q15166 354 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 GXYLT1Q4G148 440 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPIN3Q5JUX0 258 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC48A1Q6P1K1 146 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TUBA3EQ6PEY2 450 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CENPVQ7Z7K6 275 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 KLBQ86Z14 1044 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF683Q8IZ20 524 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CHST4Q8NCG5 386 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR2V1Q8NHB1 315 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 GEMIN6Q8WXD5 167 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 CITED2Q99967 270 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 TTYH2Q9BSA4 534 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 USP22Q9UPT9 525 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PCYT1BQ9Y5K3 369 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 PARP14Q460N5 1801 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 C5orf51A6NDU8 294 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 A6NIZ1 184 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF814B7Z6K7 855 aa5.16□□□□□ -1.58
CDC42BPA-209ENST00000448940 M0R233 179 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms