RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FANCFQ9NPI8 374 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 PAQR5Q9NXK6 330 aaPredicted RBP12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 PROCRQ9UNN8 238 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 HIVEP2P31629 2446 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 TLN2Q9Y4G6 2542 aa12.3□□□□□ -0.44
PDLIM2-213ENST00000448520 USF3Q68DE3 2245 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 IGLV3-32A0A0A0MS00 114 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 H3BML4 177 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 M0R3H8 397 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 SIAH2O43255 324 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 NDUFB5O43674 189 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 ADAM11O75078 769 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 SERPINB7O75635 380 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 CYP7B1O75881 506 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 PRKD3O94806 890 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 CSTAP01040 98 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 THBS1P07996 1170 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 UBTFL6P0CB48 400 aaPredicted RBP12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 GKN3PP0CG01 181 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 PRG2P13727 222 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 NID1P14543 1247 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 PPP3CBP16298 524 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 LCN1P31025 176 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 SIRPAP78324 504 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 KCNJ10P78508 379 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 HOXC5Q00444 222 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 CCNIQ14094 377 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 FLOT2Q14254 428 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 PON3Q15166 354 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 LIN52Q52LA3 116 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 C1orf146Q5VVC0 180 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 CBLN3Q6UW01 205 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 CBLL1Q75N03 491 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 FAM214BQ7L5A3 538 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 VANGL1Q8TAA9 524 aaPredicted RBP12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 FNDC9Q8TBE3 224 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF524Q96C55 264 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 HSH2DQ96JZ2 352 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 CCL19Q99731 98 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 PRR14Q9BWN1 585 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 PRRG4Q9BZD6 226 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 GORASP2Q9H8Y8 452 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 PLSCR4Q9NRQ2 329 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 DCAF13Q9NV06 445 aaKnown RBP12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 CARD8Q9Y2G2 431 aa12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 FN1P02751 2386 aaKnown RBP12.29□□□□□ -0.44
PDLIM2-213ENST00000448520 NSD1Q96L73 2696 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 PRR14LQ5THK1 2151 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 A0A1W2PQD3 144 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 H0YC42 278 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 AP3D1O14617 1153 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 SEC14L5O43304 696 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 TMCC2O75069 709 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 GMNNO75496 209 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 CIB2O75838 187 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 LY6G6DO95868 133 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 UBL4AP11441 157 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 IL11P20809 199 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 OR1E2P47887 323 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 TPD52P55327 224 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 CLDN20P56880 219 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF117Q03924 483 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 TRAP1Q12931 704 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 KPNB1Q14974 876 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 LARS2Q15031 903 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 GUSBP1Q15486 140 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 DHRS4L2Q6PKH6 230 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 EIF3MQ7L2H7 374 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 RBM45Q8IUH3 476 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 TMCO5AQ8N6Q1 288 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF527Q8NB42 609 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 COX4I2Q96KJ9 171 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 LRGUKQ96M69 825 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 RAB3IPQ96QF0 476 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 SPATA5L1Q9BVQ7 753 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 MUC13Q9H3R2 512 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 UBTD1Q9HAC8 227 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 CACYBPQ9HB71 228 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 GLRX2Q9NS18 164 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 IFT52Q9Y366 437 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 EMC9Q9Y3B6 208 aa12.28□□□□□ -0.44
PDLIM2-213ENST00000448520 A0A087WZY1 265 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 CDHR4A6H8M9 788 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 GTPBP1O00178 669 aaKnown RBP12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 MT-ND1P03886 318 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 FESP07332 822 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 PRKAR1BP31321 381 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 CCR4P51679 360 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 SELENOWP63302 87 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 SKP2Q13309 424 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 NPTX1Q15818 432 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 TMEM44Q2T9K0 475 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 BEX5Q5H9J7 111 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 RNF220Q5VTB9 566 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 PLEKHM3Q6ZWE6 761 aa12.27□□□□□ -0.45
PDLIM2-213ENST00000448520 ZNF550Q7Z398 422 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms