RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 IFITM5A6NNB3 132 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 NQO2P16083 231 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 ST8SIA6P61647 398 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 TEAD3Q99594 435 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 SIRT3Q9NTG7 399 aaPredicted RBP8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 TREM2Q9NZC2 230 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 CD84Q9UIB8 345 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 TNFSF18Q9UNG2 199 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 NUMA1Q14980 2115 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 SLC22A31A6NKX4 558 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF879B4DU55 563 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 MAGEB4O15481 346 aaPredicted RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 NARSO43776 548 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 SBK2P0C263 348 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 IRF1P10914 325 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 APEHP13798 732 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 DPP4P27487 766 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 MPIP34949 423 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 TAS2R20P59543 309 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 EEF1A1P68104 462 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF85Q03923 595 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF345Q14585 488 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 EEF1A1P5Q5VTE0 462 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF813Q6ZN06 617 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 CHST9Q7L1S5 443 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 SLC29A4Q7RTT9 530 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 GLB1L2Q8IW92 636 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 GJD3Q8N144 294 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF614Q8N883 585 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 C15orf54Q8N8G6 183 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 C19orf43Q9BQ61 176 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 IL21RQ9HBE5 538 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 PLXNA3P51805 1871 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 PLXND1Q9Y4D7 1925 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 IGLV3-16A0A075B6K0 115 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 METTL21EPA6NDL7 271 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 RTCAO00442 366 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 CHRM4P08173 479 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 RAB40ALP0C0E4 278 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 C1GALT1C1LP0DN25 315 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 SRMP19623 302 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ACOT7LQ6ZUV0 252 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 GAREM2Q75VX8 874 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 OR52L1Q8NGH7 329 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 OR51S1Q8NGJ8 323 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 RAB40AQ8WXH6 277 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 TMEM159Q96B96 161 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 GAL3ST1Q99999 423 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 APMAPQ9HDC9 416 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 MEPEQ9NQ76 525 aaPredicted RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZCCHC3Q9NUD5 404 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ST6GALNAC2Q9UJ37 374 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 SH2B3Q9UQQ2 575 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 TMEM202A6NGA9 273 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ARGFXA6NJG6 315 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 KLKB1P03952 638 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 BMP7P18075 431 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 CORO1AP31146 461 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 RPS15P62841 145 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 LIN54Q6MZP7 749 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 C11orf87Q6NUJ2 197 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF740Q8NDX6 193 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 STEAP2Q8NFT2 490 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 OR6N1Q8NGY5 312 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 C15orf40Q8WUR7 153 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 DIO2Q92813 273 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 MRPL38Q96DV4 380 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 RSRP1Q9BUV0 290 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 AP5M1Q9H0R1 490 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 TMPRSS5Q9H3S3 457 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 NOX4Q9NPH5 578 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 NTNG1Q9Y2I2 539 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF337Q9Y3M9 751 aa8.69□□□□□ -1.02
SYNPO2-204ENST00000448416 TRBV2A0A0J9YWF9 115 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 GGT3PA6NGU5 568 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 CDC42EP2O14613 210 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 OIP5O43482 229 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 BNIP3LO60238 219 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 GJB5O95377 273 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 CERS1P27544 350 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 TBPL1P62380 186 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 PPP2CBP62714 309 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 PPP2CAP67775 309 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 DEFB115Q30KQ5 88 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 GFOD2Q3B7J2 385 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 LY6G6FQ5SQ64 297 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 PWWP2BQ6NUJ5 590 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 LSRQ86X29 649 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 SUN3Q8TAQ9 357 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 KISS1RQ969F8 398 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 HIST1H2BAQ96A08 127 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 CLCC1Q96S66 551 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 NAA11Q9BSU3 229 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 PDGFDQ9GZP0 370 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 OR52D1Q9H346 318 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 POT1Q9NUX5 634 aa8.68□□□□□ -1.02
SYNPO2-204ENST00000448416 ASH2LQ9UBL3 628 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms