RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 QRSL1Q9H0R6 528 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 EMC7Q9NPA0 242 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 GFOD1Q9NXC2 390 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TAS2R16Q9NYV7 291 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 MAP1BP46821 2468 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TMEM212A6NML5 194 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TMEM189-UBE2V1I3L0A0 370 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 OR7A17O14581 309 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 FOSL1P15407 271 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TIMP2P16035 220 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 XCR1P46094 333 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 UBE2KP61086 200 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 PLA2G7Q13093 441 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 HMGN3Q15651 99 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 CLLU1OSQ5K130 101 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 HIST2H3PS2Q5TEC6 136 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 PARS2Q7L3T8 475 aaKnown RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SLC51BQ86UW2 128 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 MKXQ8IYA7 352 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SDSLQ96GA7 329 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ZBED3Q96IU2 234 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SLC19A3Q9BZV2 496 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 GALNT9Q9HCQ5 603 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SEMA4GQ9NTN9 838 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SERTAD4Q9NUC0 356 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 CPNE7Q9UBL6 633 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 CBLCQ9ULV8 474 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 MYADML2A6NDP7 307 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SLC9B1P1A6NJY1 282 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 HIDE1A8MVS5 230 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SHOXO15266 292 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 PRICKLE3O43900 615 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SDC3O75056 442 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 KCNK2O95069 426 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 EDN1P05305 212 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 DBHP09172 617 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TRAPPC2P0DI81 140 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TRAPPC2BP0DI82 140 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 LIPAP38571 399 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 CLDN12P56749 244 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 HTR4Q13639 388 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 NFATC4Q14934 902 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 FUNDC1Q8IVP5 155 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 MRPL41Q8IXM3 137 aaKnown RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 L3MBTL4Q8NA19 623 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 OR6T1Q8NGN1 323 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ABHD4Q8TB40 342 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 MZB1Q8WU39 189 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 UBTD2Q8WUN7 234 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 PCNPQ8WW12 178 aaKnown RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SLC7A6Q92536 515 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SGK3Q96BR1 496 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ARL5BQ96KC2 179 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 CRB3Q9BUF7 120 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF416Q9BWM5 594 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ADAMTS5Q9UNA0 930 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 CAMK2AQ9UQM7 478 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 A0A0B4J2A0 478 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 LOC102725191A0A1B0GVB3 256 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TRDV1A0A1B0GX56 115 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 MAN2B1O00754 1011 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TOR1AO14656 332 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 YY2O15391 372 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TK1P04183 234 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ARSAP15289 507 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SERPINA2P20848 420 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 S100A11P31949 105 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ATP1B3P54709 279 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 RPS18P62269 152 aaKnown RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 NTHL1P78549 312 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 VASNQ6EMK4 673 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 KCNIP4Q6PIL6 250 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 HTR3DQ70Z44 454 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 PELI3Q8N2H9 469 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SLC35B4Q969S0 331 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ANKRD19PQ9H560 264 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 NOX4Q9NPH5 578 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SHPKQ9UHJ6 478 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 MOKQ9UQ07 419 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 KIR2DS5A0A0G2JLQ3 304 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 A0A0G2JNG1 304 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TMEM72A0PK05 275 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 OR2A25A4D2G3 310 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ANKRD30BLA7E2S9 258 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 KDM4EB2RXH2 506 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-204ENST00000448183 KIR2DS3K7RE56 304 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ICMTO60725 284 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 M6PRP20645 277 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 IDUAP35475 653 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 DDOSTP39656 456 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 P2RY2P41231 377 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 ACSM1Q08AH1 577 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SCGB2A2Q13296 93 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 KIR2DS5Q14953 304 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 Q499Y3 187 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 NDUFAF7Q7L592 441 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 FAM122BQ7Z309 247 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 TECPR1Q7Z6L1 1165 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 NLRP8Q86W28 1048 aa7.25□□□□□ -1.25
NEDD9-204ENST00000448183 SIAH3Q8IW03 269 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms