RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ZDHHC11Q9H8X9 412 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 ACKR4Q9NPB9 350 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 LHX6Q9UPM6 363 aa17.62■□□□□ 0.41
SGCE-207ENST00000447873 PRRC2CQ9Y520 2896 aaKnown RBP17.61■□□□□ 0.41
SGCE-207ENST00000447873 LINC01387J3KSC0 135 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 CDC42EP2O14613 210 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 KLF4O43474 513 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 OR2T1O43869 369 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 SNAP29O95721 258 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 OPN1LWP04000 364 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 SFTPDP35247 375 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 CLK1P49759 484 aaKnown RBP17.61■□□□□ 0.41
SGCE-207ENST00000447873 RAC1P63000 192 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 INAQ16352 499 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 ZNF74Q16587 644 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 ZIK1Q3SY52 487 aaPredicted RBP17.61■□□□□ 0.41
SGCE-207ENST00000447873 TMEM176BQ3YBM2 270 aaPredicted RBP17.61■□□□□ 0.41
SGCE-207ENST00000447873 C19orf48Q6RUI8 117 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 CD300LDQ6UXZ3 194 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 SMPDL3BQ92485 455 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 RDH12Q96NR8 316 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 ZNF184Q99676 751 aaPredicted RBP17.61■□□□□ 0.41
SGCE-207ENST00000447873 POTEKPQ9BYX7 375 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 DEFB127Q9H1M4 99 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 NANSQ9NR45 359 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 ENOPH1Q9UHY7 261 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 SLC6A5Q9Y345 797 aa17.61■□□□□ 0.41
SGCE-207ENST00000447873 BOD1L1Q8NFC6 3051 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 UNC119BA6NIH7 251 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 GJE1A6NN92 205 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 LRRN3E7EW58 273 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 FUT1P19526 365 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 CHMP24386 653 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 GFRA1P56159 465 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 FOXK2Q01167 660 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 NADK2Q4G0N4 442 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 FAM69AQ5T7M9 428 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 PARP8Q8N3A8 854 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 PNPLA2Q96AD5 504 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 ARL5BQ96KC2 179 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 PTDSS2Q9BVG9 487 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 SLC6A15Q9H2J7 730 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 TOR3AQ9H497 397 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 LDAHQ9H6V9 325 aa17.6■□□□□ 0.41
SGCE-207ENST00000447873 MAP1BP46821 2468 aaKnown RBP17.59■□□□□ 0.41
SGCE-207ENST00000447873 PKD1L2Q7Z442 2459 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 DLGAP1O14490 977 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 OR7A10O76100 309 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 OSMP13725 252 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 IDUAP35475 653 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 MYBPHQ13203 477 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 SLC46A3Q7Z3Q1 461 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 OAFQ86UD1 273 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 LRRC17Q8N6Y2 441 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 OR13C2Q8NGS9 318 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 SLC25A36Q96CQ1 311 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 MOGAT1Q96PD6 335 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 OR5B2Q96R09 309 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 TAAR6Q96RI8 345 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 RIBC2Q9H4K1 309 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 EXO5Q9H790 373 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 LUZP4Q9P127 313 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 AP4B1Q9Y6B7 739 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 ZNF407Q9C0G0 2248 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 ITPR1Q14643 2758 aa17.59■□□□□ 0.41
SGCE-207ENST00000447873 H3BN98 237 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 MT-ATP6P00846 226 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 POU3F2P20265 443 aaPredicted RBP17.58■□□□□ 0.41
SGCE-207ENST00000447873 SHC1P29353 583 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 HSPA13P48723 471 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 SLC9A3P48764 834 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 NUP107P57740 925 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 LTBQ06643 244 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 RASSF6Q6ZTQ3 369 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 OR51A7Q8NH64 312 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 TAPBPLQ9BX59 468 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 TSPAN10Q9H1Z9 355 aaPredicted RBP17.58■□□□□ 0.41
SGCE-207ENST00000447873 FKRPQ9H9S5 495 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 REV1Q9UBZ9 1251 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 ZNF229Q9UJW7 825 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 HDGFL3Q9Y3E1 203 aa17.58■□□□□ 0.41
SGCE-207ENST00000447873 DNAJC13O75165 2243 aa17.58■□□□□ 0.4
SGCE-207ENST00000447873 TRGV5A0A0B4J1U4 118 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 A0A1W2PNR3 127 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 SOX14O95416 240 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 BGLAPP02818 100 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 HIST1H2ABP04908 130 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 GTF2E2P29084 291 aaKnown RBP17.57■□□□□ 0.4
SGCE-207ENST00000447873 STARP49675 285 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 NPRL3Q12980 569 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 MFSD13AQ14CX5 517 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 TAF11Q15544 211 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 SLC36A3Q495N2 470 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 CMPK2Q5EBM0 449 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 NHSL2Q5HYW2 709 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 HIST3H2AQ7L7L0 130 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 MAMDC2Q7Z304 686 aaPredicted RBP17.57■□□□□ 0.4
SGCE-207ENST00000447873 OR6S1Q8NH40 331 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 MFSD8Q8NHS3 518 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 NEIL3Q8TAT5 605 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms