RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 FOXF1Q12946 379 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 CLN3Q13286 438 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 ZNF74Q16587 644 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 PGGHGQ32M88 737 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 ZBED5Q49AG3 693 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 LINC00696Q6ZRV3 163 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 ADGRG3Q86Y34 549 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 GALNT16Q8N428 558 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 PSD4Q8NDX1 1056 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 OR4Q3Q8NH05 313 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 ZNF566Q969W8 418 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 TNFRSF13CQ96RJ3 184 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 UTP23Q9BRU9 249 aaKnown RBP8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 IFT27Q9BW83 186 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 POLDIP3Q9BY77 421 aaKnown RBP8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 UBQLN3Q9H347 655 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 SACM1LQ9NTJ5 587 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 LRFN1Q9P244 771 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 CHRNA9Q9UGM1 479 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 TPRKBQ9Y3C4 175 aa8.62□□□□□ -1.03
SMPD4P1-203ENST00000443839 APC2O95996 2303 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 TRAV36DV7A0A075B6V5 113 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 ZC3H12DA2A288 527 aaKnown RBP8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 A6NL46 340 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 TRIM64CA6NLI5 447 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 A8MVM7 634 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 PRKYO43930 277 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 GABRB1P18505 474 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 PCSK6P29122 969 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 RPL4P36578 427 aaKnown RBP8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 NUDT6P53370 316 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 MLLT10P55197 1068 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 FXYD6P3P58550 94 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 GABARAPL2P60520 117 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 SNRPGP62308 76 aaKnown RBP8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 CSNK2BP67870 215 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 PLPPR5Q32ZL2 321 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 THSD4Q6ZMP0 1018 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 SLC46A3Q7Z3Q1 461 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 FADS6Q8N9I5 356 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 ZNF540Q8NDQ6 660 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 OR1J4Q8NGS1 313 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 TAAR8Q969N4 342 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 RELTQ969Z4 430 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 C1GALT1C1Q96EU7 318 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 DNAJA3Q96EY1 480 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 MRGPRX4Q96LA9 322 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 Q96MT0 163 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 GNRHR2Q96P88 292 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 MOGAT1Q96PD6 335 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 MCCC2Q9HCC0 563 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 AMBNQ9NP70 447 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 TIMMDC1Q9NPL8 285 aa8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 TUBA8Q9NY65 449 aaPredicted RBP8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 RSL24D1Q9UHA3 163 aaKnown RBP8.61□□□□□ -1.03
SMPD4P1-203ENST00000443839 TMEM72A0PK05 275 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 TRIM64A6NGJ6 449 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 SHISA8B8ZZ34 492 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 SNPHO15079 494 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 PTP4A3O75365 173 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 TRMUO75648 421 aaKnown RBP8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 NDUFB2O95178 105 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 AHSA1O95433 338 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 HIST1H2ABP04908 130 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 HMGN1P05114 100 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 WT1P19544 449 aaPredicted RBP8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 SPINK2P20155 84 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 NOS3P29474 1203 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 SLC6A6P31641 620 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 CD96P40200 585 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 EIF1P41567 113 aaKnown RBP8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 DNASE1L1P49184 302 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 TEKQ02763 1124 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 GXYLT1Q4G148 440 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 AGAP7PQ5VUJ5 663 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 C1orf140Q5VVS0 124 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 TIGD3Q6B0B8 471 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 ZNF773Q6PK81 442 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 C5orf46Q6UWT4 87 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 HIST3H2AQ7L7L0 130 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 ATP6V1C2Q8NEY4 427 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 HIST1H2ACQ93077 130 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 LRR1Q96L50 414 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 AGAP4Q96P64 663 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 NPAS1Q99742 590 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 OR11A1Q9GZK7 315 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 CCDC90BQ9GZT6 254 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 ENKD1Q9H0I2 346 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 PROK2Q9HC23 129 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 PLSCR2Q9NRY7 297 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 GPR83Q9NYM4 423 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 DNAJC27Q9NZQ0 273 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 GPR52Q9Y2T5 361 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 MED12Q93074 2177 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 LAMA5O15230 3695 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 A0A0G2JMM0 328 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 A0A1W2PPB8 328 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 A0A1W2PRS3 328 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 SH3D21A4FU49 640 aa8.6□□□□□ -1.03
SMPD4P1-203ENST00000443839 KIR3DP1A8MWS1 328 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms