RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZNF433Q8N7K0 673 aaPredicted RBP16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 SLC35B4Q969S0 331 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 APH1AQ96BI3 265 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 FLVCR1Q9Y5Y0 555 aa16.7■□□□□ 0.26
HMGB3P22-201ENST00000442010 A0A1W2PP18 115 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 LIPT2A6NK58 231 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 HS3ST1O14792 307 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 NPIPB7O75200 414 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 IGHV3-9P01782 118 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 ETS2P15036 469 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 PAX1P15863 534 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 GPX2P18283 190 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 CXCR1P25024 350 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 COPZ1P61923 177 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 BNIP2Q12982 314 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 SLC17A1Q14916 467 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 TIMM23BQ5SRD1 257 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 DLEU7Q6UYE1 221 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 CADM2Q8N3J6 435 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 ZNF611Q8N823 705 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 C3orf49Q96BT1 292 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 MALT1Q9UDY8 824 aa16.69■□□□□ 0.26
HMGB3P22-201ENST00000442010 DPRXA6NFQ7 191 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 TMEM229AB2RXF0 380 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 PDLIM1O00151 329 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 FRS3O43559 492 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 EDF1O60869 148 aaKnown RBP16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 MRPL33O75394 65 aaKnown RBP16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 PPIBP23284 216 aaKnown RBP16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 ADSLP30566 484 aaPredicted RBP16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 IDUAP35475 653 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 P2RY4P51582 365 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 CEACAM7Q14002 265 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 Q5PR19 223 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 GCNT6Q5T4J0 391 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 ALKBH2Q6NS38 261 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 PRSS57Q6UWY2 283 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 COMTD1Q86VU5 262 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 P2RY8Q86VZ1 359 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 TMEM99Q8N816 258 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 NFKBIDQ8NI38 313 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 AKAP1Q92667 903 aaKnown RBP eCLIP16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 THOC1Q96FV9 657 aaKnown RBP16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 NAA11Q9BSU3 229 aaPredicted RBP16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 GSX2Q9BZM3 304 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 TMEM38AQ9H6F2 299 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 ARMC7Q9H6L4 198 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 ESRP2Q9H6T0 727 aaKnown RBP16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 NGBQ9NPG2 151 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 RNF115Q9Y4L5 304 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 ALPK2Q86TB3 2170 aa16.68■□□□□ 0.26
HMGB3P22-201ENST00000442010 NF1P21359 2839 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 A8MVM7 634 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 AKR7A3O95154 331 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 GPIP06744 558 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 GGT1P19440 569 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 PRKAR1BP31321 381 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 FOXG1P55316 489 aaPredicted RBP16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 HOXC5Q00444 222 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 CDK6Q00534 326 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 PPA1Q15181 289 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 OR7A5Q15622 319 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 ADRM1Q16186 407 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 OTUD3Q5T2D3 398 aaPredicted RBP16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 P3H2Q8IVL5 708 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 ZIC4Q8N9L1 334 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 TMEM45BQ96B21 275 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 GSX1Q9H4S2 264 aaPredicted RBP16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 RABEP2Q9H5N1 569 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 NPAP1Q9NZP6 1156 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 SLC9A8Q9Y2E8 581 aa16.67■□□□□ 0.26
HMGB3P22-201ENST00000442010 OR5H1A6NKK0 313 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 AQP7P3A6NL99 342 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 C5orf58C9J3I9 102 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 ARHGEF9O43307 516 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 TMCC2O75069 709 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 CD3EP07766 207 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 ITGA5P08648 1049 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 NCF2P19878 526 aaPredicted RBP16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 EGR4Q05215 589 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 BSPH1Q075Z2 132 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 CAPRIN1Q14444 709 aaKnown RBP16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 STK11Q15831 433 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 RUNDC3AQ59EK9 446 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 REEP3Q6NUK4 255 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 DHRS4L2Q6PKH6 230 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 C6orf89Q6UWU4 347 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 SSX8Q7RTT4 187 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 UBE2J2Q8N2K1 259 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 DPP10Q8N608 796 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 OR52E4Q8NGH9 312 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 STK35Q8TDR2 534 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 MUS81Q96NY9 551 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 CPPED1Q9BRF8 314 aaPredicted RBP16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 SF3B5Q9BWJ5 86 aaKnown RBP16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 AMBRA1Q9C0C7 1298 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 PIF1Q9H611 641 aa16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 CACYBPQ9HB71 228 aaKnown RBP16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 ZNF701Q9NV72 531 aaPredicted RBP16.66■□□□□ 0.26
HMGB3P22-201ENST00000442010 ASB6Q9NWX5 421 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms