RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 C11orf40Q8WZ69 217 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 ZHX1-C8orf76Q96EF9 292 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 MED8Q96G25 268 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 SORCS2Q96PQ0 1159 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 ZNF184Q99676 751 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 EBF4Q9BQW3 602 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 CDIP1Q9H305 208 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 GPATCH2Q9NW75 528 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 TAS2R14Q9NYV8 317 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 PEMTQ9UBM1 199 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 METRNQ9UJH8 293 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 B3GALT1Q9Y5Z6 326 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 IGSF9BQ9UPX0 1349 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 A6NNC1 897 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 ANKRD34CP0C6C1 535 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 GTF2F2P13984 249 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 UQCRFS1P47985 274 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 NUDT6P53370 316 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 HSD11B2P80365 405 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 CDR2Q01850 454 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 EGR4Q05215 589 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 HYAL1Q12794 435 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 GK2Q14410 553 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 SLC36A2Q495M3 483 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 GPR33Q49SQ1 333 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 AGKQ53H12 422 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 H3F3CQ6NXT2 135 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 TMEM179Q6ZVK1 233 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 FCRLAQ7L513 359 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 ZDHHC23Q8IYP9 409 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 TSPAN14Q8NG11 270 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 ORAI1Q96D31 301 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 CELF6Q96J87 481 aaKnown RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 BTBD10Q9BSF8 475 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 ADI1Q9BV57 179 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 SSU72Q9NP77 194 aaKnown RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 LIN7CQ9NUP9 197 aaKnown RBP9.66□□□□□ -0.86
SYNE2-206ENST00000441438 B9D1Q9UPM9 204 aa9.66□□□□□ -0.86
SYNE2-206ENST00000441438 IGLON5A6NGN9 336 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 M0QYT0 321 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 UBDO15205 165 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 AMD1P17707 334 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 TBXA2RP21731 343 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 GPR143P51810 404 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 TMED4Q7Z7H5 227 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 ISCA2Q86U28 154 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 LDB1Q86U70 411 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 TRAPPC5Q8IUR0 188 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 SYS1Q8N2H4 156 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 GPR174Q9BXC1 333 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 MROQ9BYG7 248 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 EPHX3Q9H6B9 360 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 Q9N2J8 555 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 CMAHPQ9Y471 501 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 OR10H1Q9Y4A9 318 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 HS3ST3A1Q9Y663 406 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 TP53BP1Q12888 1972 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 COL11A1P12107 1806 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 ANKRD63C9JTQ0 380 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 H2AFB1P0C5Y9 115 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 CSNK2A2P19784 350 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 IVDP26440 423 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 GABRA4P48169 554 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 CLCN3P51790 818 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 PJVKQ0ZLH3 352 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 SAXO2Q658L1 398 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 TXNDC8Q6A555 127 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 QSOX2Q6ZRP7 698 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 CPEB2Q7Z5Q1 589 aaKnown RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 TMEM132CQ8N3T6 1108 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 CHDHQ8NE62 594 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 NLGN4YQ8NFZ3 816 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 COQ8BQ96D53 544 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 WDR89Q96FK6 387 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 CDKN2AIPNLQ96HQ2 116 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 CADM1Q9BY67 442 aaKnown RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 DUSP16Q9BY84 665 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 RBM38Q9H0Z9 239 aaKnown RBP9.65□□□□□ -0.86
SYNE2-206ENST00000441438 ZNF556Q9HAH1 456 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 RNF115Q9Y4L5 304 aa9.65□□□□□ -0.86
SYNE2-206ENST00000441438 LINC00862A6NCI5 91 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 HHLA1C9JL84 531 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 RP2O75695 350 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 MMP11P24347 488 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 LIPAP38571 399 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 LHX1P48742 406 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 RPL26P61254 145 aaKnown RBP9.64□□□□□ -0.87
SYNE2-206ENST00000441438 SMIM21Q3B7S5 101 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 NANOGP8Q6NSW7 305 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 CLNKQ7Z7G1 428 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 TMPRSS6Q8IU80 811 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 ZNF383Q8NA42 475 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 SDR9C7Q8NEX9 313 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 KLQ9UEF7 1012 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 ARL5AQ9Y689 179 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 WDR81Q562E7 1941 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.64□□□□□ -0.87
SYNE2-206ENST00000441438 GSC2O15499 205 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 CREG1O75629 220 aa9.64□□□□□ -0.87
SYNE2-206ENST00000441438 RAD51DO75771 328 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms