RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 FBXW5Q969U6 566 aa17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 THOC1Q96FV9 657 aaKnown RBP17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 C18orf12Q96KH6 178 aa17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 RABEP2Q9H5N1 569 aa17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 PARPBPQ9NWS1 579 aa17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 ADPRHL2Q9NX46 363 aa17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 UPB1Q9UBR1 384 aa17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 RPS6KB2Q9UBS0 482 aa17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 CORO2BQ9UQ03 480 aa17.55■□□□□ 0.4
SHROOM1-204ENST00000440118 VPS13CQ709C8 3753 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 CADP27708 2225 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 USF3Q68DE3 2245 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 RAMP1O60894 148 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 IMPDH2P12268 514 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 GTF2E2P29084 291 aaKnown RBP17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 PTH2RP49190 550 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 IRX1P78414 480 aaPredicted RBP17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 FAPQ12884 760 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 CEACAM7Q14002 265 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 TIMM23BQ5SRD1 257 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 NCMAPQ5T1S8 102 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 ADAM5Q6NVV9 412 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 PAQR6Q6TCH4 344 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 GPAT4Q86UL3 456 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 CLIP4Q8N3C7 705 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 ZNF611Q8N823 705 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 NFKBIDQ8NI38 313 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 MAGEB18Q96M61 343 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 Q96MF0 132 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 TMEM204Q9BSN7 226 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 VIPAS39Q9H9C1 493 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 TAS2R16Q9NYV7 291 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 SLC13A4Q9UKG4 626 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 LAMP3Q9UQV4 416 aa17.54■□□□□ 0.4
SHROOM1-204ENST00000440118 A8MVM7 634 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 EVPLLA8MZ36 301 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 FRS3O43559 492 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 AKR7A3O95154 331 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 ACAA2P42765 397 aaKnown RBP17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 ATP4BP51164 291 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 NCALDP61601 193 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 RPS4XP62701 263 aaKnown RBP17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 BNIP2Q12982 314 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 LRIF1Q5T3J3 769 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 BIVMQ86UB2 503 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 P2RY8Q86VZ1 359 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 LSRQ86X29 649 aaPredicted RBP17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 KRTAP1-3Q8IUG1 177 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 FUNDC1Q8IVP5 155 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 ZNF433Q8N7K0 673 aaPredicted RBP17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 GTPBP3Q969Y2 492 aaKnown RBP17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 SPATA5L1Q9BVQ7 753 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 ADAM19Q9H013 955 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 BCL2L10Q9HD36 194 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 DLL4Q9NR61 685 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 SLC25A37Q9NYZ2 338 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 PRDM4Q9UKN5 801 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 TRIM33Q9UPN9 1127 aa17.53■□□□□ 0.4
SHROOM1-204ENST00000440118 LIPT2A6NK58 231 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 OR5H1A6NKK0 313 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 ELOA3DA6NLF2 546 aaPredicted RBP17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 KRT33AO76009 404 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 PGM3O95394 542 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 AHSA1O95433 338 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 INHBBP09529 407 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 BMP2P12643 396 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 PRG2P13727 222 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 ATP5J2P56134 94 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 H3F3AP84243 136 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 ELOA3BQ3SY89 546 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 REEP3Q6NUK4 255 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 KBTBD8Q8NFY9 601 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 ELOA3Q8NG57 546 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 OR52N5Q8NH56 324 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 CKAP2Q8WWK9 683 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 GSX2Q9BZM3 304 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 GSX1Q9H4S2 264 aaPredicted RBP17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 NPHS2Q9NP85 383 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 TMEM45AQ9NWC5 275 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 VAPAQ9P0L0 249 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 MALT1Q9UDY8 824 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 DCTN4Q9UJW0 460 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 FLVCR1Q9Y5Y0 555 aa17.52■□□□□ 0.4
SHROOM1-204ENST00000440118 A0A1W2PP18 115 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 ANGPT2O15123 496 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 TMCC2O75069 709 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 ARAFP10398 606 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 ETS2P15036 469 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 SLC6A2P23975 617 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 HOXC5Q00444 222 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 CDK6Q00534 326 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 PAGE3Q5JUK9 113 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 C9orf135Q5VTT2 229 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 C1orf140Q5VVS0 124 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 TMEM225Q6GV28 225 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 KLHL17Q6TDP4 642 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 ATG4DQ86TL0 474 aaPredicted RBP17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 TMEM99Q8N816 258 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 OR9K2Q8NGE7 335 aa17.51■□□□□ 0.39
SHROOM1-204ENST00000440118 RNF217Q8TC41 542 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms