RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZNF582Q96NG8 517 aaPredicted RBP13.01□□□□□ -0.33
LIMD1-202ENST00000440097 DPYSL5Q9BPU6 564 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 LMF2Q9BU23 707 aaKnown RBP13.01□□□□□ -0.33
LIMD1-202ENST00000440097 TESQ9UGI8 421 aaKnown RBP13.01□□□□□ -0.33
LIMD1-202ENST00000440097 GMEB2Q9UKD1 530 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 ING4Q9UNL4 249 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 GSTK1Q9Y2Q3 226 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 EP300Q09472 2414 aaPredicted RBP13.01□□□□□ -0.33
LIMD1-202ENST00000440097 AKAP8O43823 692 aaKnown RBP13.01□□□□□ -0.33
LIMD1-202ENST00000440097 TSPAN9O75954 239 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 HPGDP15428 266 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 CSF2RBP32927 897 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 STAT5AP42229 794 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 CFHR1Q03591 330 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 SERTAD2Q14140 314 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 EXOSC6Q5RKV6 272 aaKnown RBP13.01□□□□□ -0.33
LIMD1-202ENST00000440097 METAP1DQ6UB28 335 aaPredicted RBP13.01□□□□□ -0.33
LIMD1-202ENST00000440097 NPSR1Q6W5P4 371 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 WDR88Q6ZMY6 472 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 GHDCQ8N2G8 530 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 OR1L3Q8NH93 324 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 NUDT22Q9BRQ3 303 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 G6PC3Q9BUM1 346 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 RAB33BQ9H082 229 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 POLE3Q9NRF9 147 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 C20orf141Q9NUB4 165 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 CBLCQ9ULV8 474 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 PI4KAP42356 2102 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 CACNA1EQ15878 2313 aa13.01□□□□□ -0.33
LIMD1-202ENST00000440097 SOX30O94993 753 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 BMP7P18075 431 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 ATP6V1E1P36543 226 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 TRILQ7L0X0 811 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 SHFQ7M4L6 423 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 COMMD7Q86VX2 200 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 OR2T33Q8NG76 320 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 OR52L1Q8NGH7 329 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 TSLPQ969D9 159 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 GAL3ST4Q96RP7 486 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 MED28Q9H204 178 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 ZFP64Q9NPA5 681 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 SERTAD3Q9UJW9 196 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 MED31Q9Y3C7 131 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 TRIM77I1YAP6 450 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 RAF1P04049 648 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 ATF4P18848 351 aaPredicted RBP13□□□□□ -0.33
LIMD1-202ENST00000440097 MFSD13AQ14CX5 517 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 NDUFAF6Q330K2 333 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 VWA2Q5GFL6 755 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 BCL2L15Q5TBC7 163 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF620Q6ZNG0 422 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 GATSQ8NAP1 163 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 FANK1Q8TC84 345 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 UFD1Q92890 307 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 CCDC74AQ96AQ1 378 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 PRSS27Q9BQR3 290 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF559Q9BR84 538 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 HDHD2Q9H0R4 259 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 RPS6KB2Q9UBS0 482 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF222Q9UK12 451 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 ATXN7L1Q9ULK2 861 aaPredicted RBP13□□□□□ -0.33
LIMD1-202ENST00000440097 CLDN16Q9Y5I7 305 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 CSNK1G3Q9Y6M4 447 aa13□□□□□ -0.33
LIMD1-202ENST00000440097 EML5Q05BV3 1969 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 CSTAP01040 98 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 CT45A8P0DMV1 189 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 CT45A9P0DMV2 189 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 CD79BP40259 229 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 RGS19P49795 217 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 IGLV3-21P80748 117 aaPredicted RBP12.99□□□□□ -0.33
LIMD1-202ENST00000440097 TPBGQ13641 420 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 GPR176Q14439 515 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 CT45A2Q5DJT8 189 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 ALG10BQ5I7T1 473 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 ARHGAP40Q5TG30 622 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 KCTD20Q7Z5Y7 419 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 LRRC17Q8N6Y2 441 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 GALNT11Q8NCW6 608 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 OR11H4Q8NGC9 324 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 OR4Q3Q8NH05 313 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 OR4C3Q8NH37 302 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 RNFT2Q96EX2 444 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 HEXA-AS1Q9H8Q6 139 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 FGF21Q9NSA1 209 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 C14orf105Q9NVL8 296 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 IL20Q9NYY1 176 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 ZNF224Q9NZL3 707 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 H2AFY2Q9P0M6 372 aaPredicted RBP12.99□□□□□ -0.33
LIMD1-202ENST00000440097 UNC119BA6NIH7 251 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 CFIP05156 583 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 TPOP07202 933 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 IFI6P09912 130 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 FBLP22087 321 aaKnown RBP12.99□□□□□ -0.33
LIMD1-202ENST00000440097 GABRA5P31644 462 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 MTNR1AP48039 350 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 CCR4P51679 360 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 ASB18Q6ZVZ8 466 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 BMP8AQ7Z5Y6 402 aa12.99□□□□□ -0.33
LIMD1-202ENST00000440097 CDH24Q86UP0 819 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms