RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ZER1Q7Z7L7 766 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 AKAP14Q86UN6 197 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 RAB43Q86YS6 212 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CMIPQ8IY22 773 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CADM3Q8N126 398 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF321PQ8N8H1 164 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF485Q8NCK3 441 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 NUP43Q8NFH3 380 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 OR1N1Q8NGS0 311 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 UBE2FQ969M7 185 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 GIMAP5Q96F15 307 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 KCTD7Q96MP8 289 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CMTM3Q96MX0 182 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 RHNO1Q9BSD3 238 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 OR51E2Q9H255 320 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 SLC38A1Q9H2H9 487 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 PIGUQ9H490 435 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ENAMQ9NRM1 1142 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 ALKBH4Q9NXW9 302 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 CAB39Q9Y376 341 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 FREM3P0C091 2139 aa4.36□□□□□ -1.71
EDEM3-203ENST00000439962 UBR5O95071 2799 aaPredicted RBP4.36□□□□□ -1.71
EDEM3-203ENST00000439962 PRAMEF27A3QJZ7 478 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 B8ZZF3 427 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 H3BN98 237 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 RGS13O14921 159 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CDC40O60508 579 aaKnown RBP eCLIP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PLOD3O60568 738 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SEMA7AO75326 666 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 GPX5O75715 221 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TPPPO94811 219 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 HLA-DPB1P04440 258 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 HMGN2P05204 90 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TNFRSF1BP20333 461 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SDC2P34741 201 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 FEN1P39748 380 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 MTNR1AP48039 350 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PSMD4P55036 377 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CTBP2P56545 445 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TAS2R41P59536 307 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SCN1BQ07699 218 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SYPL1Q16563 259 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PRTGQ2VWP7 1150 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 RPS26P11Q5JNZ5 115 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 DDI2Q5TDH0 399 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 AADACL4Q5VUY2 407 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 MFSD12Q6NUT3 480 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF613Q6PF04 617 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 IGF2-ASQ6U949 168 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TMPRSS11AQ6ZMR5 421 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 Q6ZPB1 254 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 MED25Q71SY5 747 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 NUP54Q7Z3B4 507 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 WDR53Q7Z5U6 358 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 GPALPP1Q8IXQ4 340 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CDRT4Q8N9R6 151 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 OR4K14Q8NGD5 310 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PHYHIPQ92561 330 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CNRIP1Q96F85 164 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 MRPL48Q96GC5 212 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 JSRP1Q96MG2 331 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CHCHD6Q9BRQ6 235 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CENPOQ9BU64 300 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 C6orf62Q9GZU0 229 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF350Q9GZX5 532 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF275Q9NSD4 429 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ASF1BQ9NVP2 202 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 HAO2Q9NYQ3 351 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SEMA5BQ9P283 1151 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF229Q9UJW7 825 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CBLCQ9ULV8 474 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 C19orf53Q9UNZ5 99 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SF3B6Q9Y3B4 125 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PCDHGB7Q9Y5F8 929 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 DOCK7Q96N67 2140 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CACNA1CQ13936 2221 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 C2orf72A6NCS6 295 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 J3QRE1 110 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SOCS6O14544 535 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 SURF4O15260 269 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 B3GALT2O43825 422 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 GALR3O60755 368 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 COQ9O75208 318 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 RCBTB2O95199 551 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 EPPINO95925 133 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 CPN2P22792 545 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 LCN1P31025 176 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 MAP3K8P41279 467 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TMED10P49755 219 aaKnown RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ACTC1P68032 377 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ACTA1P68133 377 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 GLYR1Q49A26 553 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 HSD17B12Q53GQ0 312 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 FHL5Q5TD97 284 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF468Q5VIY5 522 aaPredicted RBP4.35□□□□□ -1.71
EDEM3-203ENST00000439962 AGAP6Q5VW22 663 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 TIGD3Q6B0B8 471 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 PAMR1Q6UXH9 720 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 BAIAP2L2Q6UXY1 529 aa4.35□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF517Q6ZMY9 492 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms