RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 IKZF5Q9H5V7 419 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 PIF1Q9H611 641 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 KAT8Q9H7Z6 458 aaKnown RBP9.3□□□□□ -0.92
MCF2L-216ENST00000439475 NANOGQ9H9S0 305 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 SLC9A8Q9Y2E8 581 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 CHST2Q9Y4C5 530 aa9.3□□□□□ -0.92
MCF2L-216ENST00000439475 FBP2O00757 339 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 FRS3O43559 492 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 ADAP00813 363 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 DNAJA1P31689 397 aaKnown RBP9.29□□□□□ -0.92
MCF2L-216ENST00000439475 SLC16A1P53985 500 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 NR1H2P55055 460 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 H3F3AP84243 136 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 KEAP1Q14145 624 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 POU4F3Q15319 338 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 ADRM1Q16186 407 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 VMACQ2NL98 169 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 BEX5Q5H9J7 111 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 ALG10BQ5I7T1 473 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 C1orf140Q5VVS0 124 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 FBXW9Q5XUX1 488 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 FAM91A1Q658Y4 838 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 Q6ZT83 130 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 ARPINQ7Z6K5 226 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 CPLX4Q7Z7G2 160 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 ATG4DQ86TL0 474 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-216ENST00000439475 CXorf67Q86X51 503 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-216ENST00000439475 SNX32Q86XE0 403 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 PTOV1Q86YD1 416 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 CCDC103Q8IW40 242 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 GABRG1Q8N1C3 465 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 UBE2J2Q8N2K1 259 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 MFSD8Q8NHS3 518 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 C10orf82Q8WW14 230 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 HSD17B8Q92506 261 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 KISS1RQ969F8 398 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-216ENST00000439475 SLC38A4Q969I6 547 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 APH1AQ96BI3 265 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 PIK3IP1Q96FE7 263 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 EPYCQ99645 322 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 C6orf203Q9P0P8 240 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-216ENST00000439475 UPB1Q9UBR1 384 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 ST6GALNAC2Q9UJ37 374 aa9.29□□□□□ -0.92
MCF2L-216ENST00000439475 ING1Q9UK53 422 aaPredicted RBP9.29□□□□□ -0.92
MCF2L-216ENST00000439475 NAV2Q8IVL1 2488 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 CIB4A0PJX0 185 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 ZC3H12DA2A288 527 aaKnown RBP9.28□□□□□ -0.92
MCF2L-216ENST00000439475 LIPT2A6NK58 231 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 ZNF716A6NP11 495 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 ZNF814B7Z6K7 855 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 NDUFAB1O14561 156 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 TPST1O60507 370 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 AKR7A3O95154 331 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 LGI1O95970 557 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 PCGF2P35227 344 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 PCBP3P57721 371 aaKnown RBP9.28□□□□□ -0.92
MCF2L-216ENST00000439475 HOXC5Q00444 222 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 BNIP2Q12982 314 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 VEZF1Q14119 521 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 SELPLGQ14242 412 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 MFSD13AQ14CX5 517 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 OR1Q1Q15612 314 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 GLIPR1L2Q4G1C9 344 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 BHLHA15Q7RTS1 189 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-216ENST00000439475 P2RY8Q86VZ1 359 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 WFDC8Q8IUA0 241 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 TMEM99Q8N816 258 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 SMYD1Q8NB12 490 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 SLC25A36Q96CQ1 311 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 MUCL1Q96DR8 90 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 MCHR1Q99705 422 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 ELAC2Q9BQ52 826 aaKnown RBP9.28□□□□□ -0.92
MCF2L-216ENST00000439475 EFCAB1Q9HAE3 211 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 ASB6Q9NWX5 421 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 ADPRHL2Q9NX46 363 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 PRSS50Q9UI38 385 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 RASD1Q9Y272 281 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 CREBBPQ92793 2442 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 FREM1Q5H8C1 2179 aa9.28□□□□□ -0.92
MCF2L-216ENST00000439475 NOTCH2Q04721 2471 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 A0A087WUJ7 227 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 A0A1B0GWA3 101 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 GMNCA6NCL1 334 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 OR6C65A6NJZ3 312 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 AQP7P3A6NL99 342 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 CCT8L1PA6NM43 557 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 FMO6PO60774 539 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 GCM2O75603 506 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-216ENST00000439475 RAF1P04049 648 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 KLK2P20151 261 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 CCKARP32238 428 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 IFNA8P32881 189 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 RPS5P46782 204 aaKnown RBP9.27□□□□□ -0.93
MCF2L-216ENST00000439475 ART1P52961 327 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 IST1P53990 364 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 TGFBR3Q03167 851 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 DMTNQ08495 405 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 SLC17A1Q14916 467 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 DUSP7Q16829 419 aa9.27□□□□□ -0.93
MCF2L-216ENST00000439475 SWT1Q5T5J6 900 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms