RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TSPAN10Q9H1Z9 355 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 DIABLOQ9NR28 239 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 C20orf141Q9NUB4 165 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ING1Q9UK53 422 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 MRPS2Q9Y399 296 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 EXOSC1Q9Y3B2 195 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 UNC13CQ8NB66 2214 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC22A23A1A5C7 686 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 DISC1C4P0D8 188 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 MAN2B1O00754 1011 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 SHOXO15266 292 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 FLRT2O43155 660 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 B3GALT2O43825 422 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 RP2O75695 350 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMIGD3P0DMS9 266 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 IGFALSP35858 605 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 NUDT1P36639 197 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZP1P60852 638 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 PPP1CAP62136 330 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 HTRA4P83105 476 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 MC2RQ01718 297 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 NDUFAF6Q330K2 333 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 C12orf73Q69YU5 71 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 PAQR7Q86WK9 346 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 OOSP2Q86WS3 158 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC44A3Q8N4M1 653 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 POGLUT1Q8NBL1 392 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR2T33Q8NG76 320 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 GOT1L1Q8NHS2 421 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ABHD4Q8TB40 342 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ELP4Q96EB1 424 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 TOE1Q96GM8 510 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 TSNAXQ99598 290 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 EPHX3Q9H6B9 360 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 PELI2Q9HAT8 420 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR2S2Q9NQN1 319 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ASF1BQ9NVP2 202 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZSCAN32Q9NX65 697 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 BABAM2Q9NXR7 383 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 THAP10Q9P2Z0 257 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRDV1A0A1B0GX56 115 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 A8MVJ9 347 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 H7C1C5 153 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRIM77I1YAP6 450 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 CLEC3AO75596 197 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 HOXD4P09016 255 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 CTRB1P17538 263 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 F8A1P23610 371 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 LCN6P62502 163 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 MAT1AQ00266 395 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 DPTQ07507 201 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TPBGQ13641 420 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 DUSP5Q16690 384 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 C3orf38Q5JPI3 329 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMEM69Q5SWH9 247 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 CTRB2Q6GPI1 263 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 NRROSQ86YC3 692 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 FAM26EQ8N5C1 309 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR52E2Q8NGJ4 325 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 FAM174AQ8TBP5 190 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 C7orf50Q9BRJ6 194 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 RSPH9Q9H1X1 276 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 NKX2-4Q9H2Z4 354 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR52D1Q9H346 318 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TCEAL2Q9H3H9 227 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 HEXA-AS1Q9H8Q6 139 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 A4GALTQ9NPC4 353 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC22A11Q9NSA0 550 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMEM74BQ9NUR3 256 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 SF3B6Q9Y3B4 125 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 RPS10-NUDT3A0A1W2PQS6 291 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 C4orf47A7E2U8 309 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 GPR31O00270 319 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 NUDT14O95848 222 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 RRASP10301 218 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 DRD2P14416 443 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 GBX2P52951 348 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 ELOAQ14241 798 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 GNA13Q14344 377 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 DUSP6Q16828 381 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 GSG1Q2KHT4 349 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 LINC00303Q3SY05 128 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 MINDY4Q4G0A6 757 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMEM52BQ4KMG9 183 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 PLA1AQ53H76 456 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMPRSS12Q86WS5 348 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 LRRC28Q86X40 367 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR56A1Q8NGH5 318 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 RAB7BQ96AH8 199 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TBC1D20Q96BZ9 403 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TSSK2Q96PF2 358 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 GHITMQ9H3K2 345 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 SYNDIG1Q9H7V2 258 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 FANCFQ9NPI8 374 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 SOHLH2Q9NX45 425 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 PLCL2Q9UPR0 1127 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 SPACA6W5XKT8 324 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRBV23-1A0A0A0MS06 115 aa9.17□□□□□ -0.94
CDC42SE1-202ENST00000439374 TSPAN11A1L157 253 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms