RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PRO1933Q9H354 126 aa14.64□□□□□ -0.07
DHFR-201ENST00000439211 AHRP35869 848 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 KHKP50053 298 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 HTRA4P83105 476 aaPredicted RBP14.63□□□□□ -0.07
DHFR-201ENST00000439211 IKZF1Q13422 519 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 DHCR24Q15392 516 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 ZNF750Q32MQ0 723 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 FCRLBQ6BAA4 426 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 ACSM5Q6NUN0 579 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 OR6T1Q8NGN1 323 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 RAB3CQ96E17 227 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 CACNA1CQ13936 2221 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 HEPACAM2A8MVW5 462 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 CLTBP09497 229 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 NDUFB7P17568 137 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 FGF9P31371 208 aaPredicted RBP14.63□□□□□ -0.07
DHFR-201ENST00000439211 FAUP35544 74 aaKnown RBP14.63□□□□□ -0.07
DHFR-201ENST00000439211 SLC1A3P43003 542 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 RAB5CP51148 216 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 LSM11P83369 360 aaKnown RBP eCLIP14.63□□□□□ -0.07
DHFR-201ENST00000439211 RAB40BQ12829 278 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 TCEAL5Q5H9L2 206 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 FAM69AQ5T7M9 428 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 KIAA1211LQ6NV74 962 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 LRRTM4Q86VH4 590 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 INO80EQ8NBZ0 244 aaPredicted RBP14.63□□□□□ -0.07
DHFR-201ENST00000439211 UNKLQ9H9P5 680 aaKnown RBP14.63□□□□□ -0.07
DHFR-201ENST00000439211 PPIL1Q9Y3C6 166 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 ZNF780BQ9Y6R6 833 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 A0A1B0GTQ1 180 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 FFAR1O14842 300 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 PRODHO43272 600 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 HMGN2P05204 90 aaKnown RBP14.63□□□□□ -0.07
DHFR-201ENST00000439211 SNRNP70P08621 437 aaKnown RBP14.63□□□□□ -0.07
DHFR-201ENST00000439211 MMP11P24347 488 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 ZNF561Q8N587 486 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 OR1F2PQ96R84 312 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 SLC25A19Q9HC21 320 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 TCF7L1Q9HCS4 588 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 MRPS30Q9NP92 439 aaKnown RBP14.63□□□□□ -0.07
DHFR-201ENST00000439211 ISYNA1Q9NPH2 558 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 OR1A2Q9Y585 309 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 HCFC2Q9Y5Z7 792 aa14.63□□□□□ -0.07
DHFR-201ENST00000439211 PRICKLE3O43900 615 aaPredicted RBP14.62□□□□□ -0.07
DHFR-201ENST00000439211 THEGLP0DJG4 465 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 CCL5P13501 91 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 BMP7P18075 431 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 LAP3P28838 519 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 NPBWR1P48145 328 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 AVL9Q8NBF6 648 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 FCAMRQ8WWV6 532 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 TM4SF18Q96CE8 201 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 C19orf43Q9BQ61 176 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 FBXL3Q9UKT7 428 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 LAMA2P24043 3122 aaKnown RBP14.62□□□□□ -0.07
DHFR-201ENST00000439211 DAPL1A0PJW8 107 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 TMEM82A0PJX8 343 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 HIDE1A8MVS5 230 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 ACP2P11117 423 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 MAT2AP31153 395 aaKnown RBP14.62□□□□□ -0.07
DHFR-201ENST00000439211 HSD17B7P56937 341 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 PRR5P85299 388 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 CAMKMTQ7Z624 323 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 LRRTM1Q86UE6 522 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 OR10R2Q8NGX6 335 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 SETD7Q8WTS6 366 aaKnown RBP14.62□□□□□ -0.07
DHFR-201ENST00000439211 HHIPQ96QV1 700 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 TTTY10Q9BZA0 68 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 HRH4Q9H3N8 390 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 TMPRSS5Q9H3S3 457 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 FAM183AA6NL82 134 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 C1QTNF3-AMACRE9PGA6 284 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 CTSAP10619 480 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 SFTPCP11686 197 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 ABCD3P28288 659 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 BDKRB2P30411 391 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 PLA2G7Q13093 441 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 UBXN2BQ14CS0 331 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 GLT8D1Q68CQ7 371 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 TSSK4Q6SA08 328 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 UNQ6126/PRO20091Q6UXV3 157 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 GPR32P1Q8NGA4 272 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 OR1J4Q8NGS1 313 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 NEURL3Q96EH8 262 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 TMEM68Q96MH6 324 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 DTX4Q9Y2E6 619 aa14.62□□□□□ -0.07
DHFR-201ENST00000439211 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.61□□□□□ -0.07
DHFR-201ENST00000439211 NRG2O14511 850 aaPredicted RBP14.61□□□□□ -0.07
DHFR-201ENST00000439211 ITGA10O75578 1167 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 AIMP2Q13155 320 aaKnown RBP14.61□□□□□ -0.07
DHFR-201ENST00000439211 SGCGQ13326 291 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 FAM83HQ6ZRV2 1179 aaPredicted RBP14.61□□□□□ -0.07
DHFR-201ENST00000439211 TECPR1Q7Z6L1 1165 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 SKA3Q8IX90 412 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 ZNF383Q8NA42 475 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 C16orf58Q96GQ5 468 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 ZNF350Q9GZX5 532 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 EXO5Q9H790 373 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 RNF215Q9Y6U7 377 aa14.61□□□□□ -0.07
DHFR-201ENST00000439211 FNDC1Q4ZHG4 1894 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms