RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 SMR3AQ99954 134 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 TMEM204Q9BSN7 226 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 SPATA9Q9BWV2 254 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 POTEKPQ9BYX7 375 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 RAD21L1Q9H4I0 556 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 DLL4Q9NR61 685 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 ADPRHL2Q9NX46 363 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 EMC3Q9P0I2 261 aa12.22□□□□□ -0.45
PRAME-209ENST00000439106 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.22□□□□□ -0.45
PRAME-209ENST00000439106 TPST1O60507 370 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 EDF1O60869 148 aaKnown RBP12.21□□□□□ -0.45
PRAME-209ENST00000439106 AQP1P29972 269 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 CLK1P49759 484 aaKnown RBP12.21□□□□□ -0.45
PRAME-209ENST00000439106 ATP4BP51164 291 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 SLC16A1P53985 500 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 COPZ1P61923 177 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 SLC35A1P78382 337 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 BSPH1Q075Z2 132 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 SELPLGQ14242 412 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 P2RY6Q15077 328 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 PDK3Q15120 406 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 NCMAPQ5T1S8 102 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 OTUD3Q5T2D3 398 aaPredicted RBP12.21□□□□□ -0.45
PRAME-209ENST00000439106 FBXW9Q5XUX1 488 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 ADAM5Q6NVV9 412 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 C20orf204Q6ZNR8 217 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 P3H2Q8IVL5 708 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 ZNF433Q8N7K0 673 aaPredicted RBP12.21□□□□□ -0.45
PRAME-209ENST00000439106 OR52N5Q8NH56 324 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 LILRB1Q8NHL6 650 aaPredicted RBP12.21□□□□□ -0.45
PRAME-209ENST00000439106 CPPED1Q9BRF8 314 aaPredicted RBP12.21□□□□□ -0.45
PRAME-209ENST00000439106 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 HDHD5Q9BXW7 423 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 ZNF385DQ9H6B1 395 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 CACYBPQ9HB71 228 aaKnown RBP12.21□□□□□ -0.45
PRAME-209ENST00000439106 BCL2L10Q9HD36 194 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 THUMPD1Q9NXG2 353 aaKnown RBP12.21□□□□□ -0.45
PRAME-209ENST00000439106 NPAP1Q9NZP6 1156 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 TRAPPC4Q9Y296 219 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 FLVCR1Q9Y5Y0 555 aa12.21□□□□□ -0.45
PRAME-209ENST00000439106 ZANQ9Y493 2812 aa12.21□□□□□ -0.46
PRAME-209ENST00000439106 NSD1Q96L73 2696 aaPredicted RBP12.21□□□□□ -0.46
PRAME-209ENST00000439106 CSPG4Q6UVK1 2322 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 A0A0G2JND7 137 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 DPRXA6NFQ7 191 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 LIPT2A6NK58 231 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 CCT8L1PA6NM43 557 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 TMEM229AB2RXF0 380 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 HS3ST1O14792 307 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 DNPH1O43598 174 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 MRPL33O75394 65 aaKnown RBP12.2□□□□□ -0.46
PRAME-209ENST00000439106 ITGA5P08648 1049 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 PTNP21246 168 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 HTR2AP28223 471 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 CDK6Q00534 326 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 FAPQ12884 760 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 SCARB2Q14108 478 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 PPA1Q15181 289 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 DLEU7Q6UYE1 221 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 DHDDSQ86SQ9 333 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 GPAT4Q86UL3 456 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 RETREG3Q86VR2 466 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 HSD17B8Q92506 261 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 PIGTQ969N2 578 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 ZNF385AQ96PM9 386 aaKnown RBP12.2□□□□□ -0.46
PRAME-209ENST00000439106 WFDC6Q9BQY6 131 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 NAA11Q9BSU3 229 aaPredicted RBP12.2□□□□□ -0.46
PRAME-209ENST00000439106 SLC7A10Q9NS82 523 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 SEC14L4Q9UDX3 406 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 ZNF232Q9UNY5 417 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 IFT52Q9Y366 437 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 RNF115Q9Y4L5 304 aa12.2□□□□□ -0.46
PRAME-209ENST00000439106 A0A1W2PP18 115 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 CIB4A0PJX0 185 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 GPR171O14626 319 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 EIF1BO60739 113 aaKnown RBP12.19□□□□□ -0.46
PRAME-209ENST00000439106 GPIP06744 558 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 CD3EP07766 207 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 GGT1P19440 569 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 FKBP2P26885 142 aaKnown RBP12.19□□□□□ -0.46
PRAME-209ENST00000439106 PTH2RP49190 550 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 RIPPLY3P57055 190 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 MTPNP58546 118 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 LGALS3BPQ08380 585 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 SPOCK1Q08629 439 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 SLC17A1Q14916 467 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 TSPO2Q5TGU0 170 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 C1orf140Q5VVS0 124 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 PAQR6Q6TCH4 344 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 Q71RC1 249 aaPredicted RBP12.19□□□□□ -0.46
PRAME-209ENST00000439106 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
PRAME-209ENST00000439106 IGFBPL1Q8WX77 278 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 SLC25A36Q96CQ1 311 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 Q96MF0 132 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 PIP5K1AQ99755 562 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 TAPBPLQ9BX59 468 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 ASB6Q9NWX5 421 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 MALT1Q9UDY8 824 aa12.19□□□□□ -0.46
PRAME-209ENST00000439106 LEF1Q9UJU2 399 aaPredicted RBP12.19□□□□□ -0.46
PRAME-209ENST00000439106 LAMP3Q9UQV4 416 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms