RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ZNF385BQ569K4 471 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 DLEU7Q6UYE1 221 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 ZNF621Q6ZSS3 439 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 DEPDC4Q8N2C3 294 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 OR2L13Q8N349 312 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 OR8J3Q8NGG0 315 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 GPR151Q8TDV0 419 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 MOAP1Q96BY2 351 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 C1orf159Q96HA4 380 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 PIMREGQ9BSJ6 248 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 ADAM19Q9H013 955 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 RAD21L1Q9H4I0 556 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 EQTNQ9NQ60 294 aa12.4□□□□□ -0.42
LINC01088-201ENST00000437737 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.4□□□□□ -0.42
LINC01088-201ENST00000437737 GJE1A6NN92 205 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 KCNAB3O43448 404 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 PSMG1O95456 288 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 KRT75O95678 551 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 C6orf47O95873 294 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 IFI6P09912 130 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 HPGDP15428 266 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 UQCRC2P22695 453 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 IGHV1-2P23083 117 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 PTAFRP25105 342 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 GPC1P35052 558 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
LINC01088-201ENST00000437737 MAGEA8P43361 318 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 OR3A2P47893 321 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 PDLIM4P50479 330 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 ZNF83P51522 516 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 CHRNB3Q05901 458 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 FOXF1Q12946 379 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 CR1LQ2VPA4 569 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 SAMD4BQ5PRF9 694 aaKnown RBP12.39□□□□□ -0.43
LINC01088-201ENST00000437737 C8orf82Q6P1X6 216 aaPredicted RBP12.39□□□□□ -0.43
LINC01088-201ENST00000437737 KLHL17Q6TDP4 642 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 B3GLCTQ6Y288 498 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 P2RY8Q86VZ1 359 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 ANKRD46Q86W74 232 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 SLC43A2Q8N370 569 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.39□□□□□ -0.43
LINC01088-201ENST00000437737 ATP6V1C2Q8NEY4 427 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 OR4C3Q8NH37 302 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 B4GALNT2Q8NHY0 566 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 PSMA8Q8TAA3 256 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 CIDECQ96AQ7 238 aaPredicted RBP12.39□□□□□ -0.43
LINC01088-201ENST00000437737 AMDHD1Q96NU7 426 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 ANKRD27Q96NW4 1050 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 THTPAQ9BU02 230 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 PRR14Q9BWN1 585 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 PAIP1Q9H074 479 aaKnown RBP12.39□□□□□ -0.43
LINC01088-201ENST00000437737 HEATR1Q9H583 2144 aaKnown RBP12.39□□□□□ -0.43
LINC01088-201ENST00000437737 KLHL9Q9P2J3 617 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 PCDHB14Q9Y5E9 798 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 GMEB1Q9Y692 573 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 PMF1-BGLAPU3KQ54 211 aa12.39□□□□□ -0.43
LINC01088-201ENST00000437737 IGHV3-15A0A0B4J1V0 119 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 OR5H1A6NKK0 313 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 TTC36A6NLP5 189 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 RAD51DO75771 328 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 ENPP1P22413 925 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 ELK4P28324 431 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 HBA1P69905 142 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 TXNL4AP83876 142 aaKnown RBP12.38□□□□□ -0.43
LINC01088-201ENST00000437737 CHRNEQ04844 493 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 CARTPTQ16568 116 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 PRSS53Q2L4Q9 553 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 TMEM176BQ3YBM2 270 aaPredicted RBP12.38□□□□□ -0.43
LINC01088-201ENST00000437737 IQCCQ4KMZ1 466 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 RUNDC3AQ59EK9 446 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 NANOGP8Q6NSW7 305 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 ZNF544Q6NX49 715 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 CLECL1Q8IZS7 167 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 OR52N5Q8NH56 324 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 ELP4Q96EB1 424 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 CDRT15Q96T59 188 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 KLHDC3Q9BQ90 382 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 ECSITQ9BQ95 431 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 PSD2Q9BQI7 771 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 INPP5KQ9BT40 448 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 THUMPD3Q9BV44 507 aaKnown RBP12.38□□□□□ -0.43
LINC01088-201ENST00000437737 CADM1Q9BY67 442 aaKnown RBP12.38□□□□□ -0.43
LINC01088-201ENST00000437737 GLIPR2Q9H4G4 154 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 CXorf36Q9H7Y0 433 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 NANOGQ9H9S0 305 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 BCO1Q9HAY6 547 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 ADA2Q9NZK5 511 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 TMEM181Q9P2C4 612 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 FKBP7Q9Y680 259 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 ATP23Q9Y6H3 246 aa12.38□□□□□ -0.43
LINC01088-201ENST00000437737 VWC2LB2RUY7 222 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 M0R1B8 84 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 NDUFS8O00217 210 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 CLIC1O00299 241 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 SCDO00767 359 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 STAMBPO95630 424 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 NUDT14O95848 222 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 NGFRP08138 427 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 LINGO3P0C6S8 592 aa12.37□□□□□ -0.43
LINC01088-201ENST00000437737 NQO1P15559 274 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms