RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 LCN1P31025 176 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 RCVRNP35243 200 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 RRAS2P62070 204 aaPredicted RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 MRPL28Q13084 256 aaKnown RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 GPR176Q14439 515 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ELOA3BQ3SY89 546 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 KLHL26Q53HC5 615 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 CT45A2Q5DJT8 189 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 SLC6A19Q695T7 634 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 UNQ9370/PRO34162Q6UXP9 181 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ZNF615Q8N8J6 731 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 SMRP1Q8NCR6 262 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 C17orf47Q8NEP4 570 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ELOA3Q8NG57 546 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 C16orf52Q8NHV5 167 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 GRPEL2Q8TAA5 225 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 LIPHQ8WWY8 451 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 AKAP1Q92667 903 aaKnown RBP eCLIP9.56□□□□□ -0.88
CD44-210ENST00000434472 C3orf49Q96BT1 292 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 RNF31Q96EP0 1072 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 PELI1Q96FA3 418 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 LRRC61Q9BV99 259 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 NMNAT2Q9BZQ4 307 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 MARCH7Q9H992 704 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 NCDNQ9UBB6 729 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 MOKQ9UQ07 419 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ERVK-19Q9WJR5 959 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 DTX4Q9Y2E6 619 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 MMACHCQ9Y4U1 282 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 CACNG2Q9Y698 323 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 HRKO00198 91 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 ZNF217O75362 1048 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 GLCEO94923 617 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 UBL3O95164 117 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 C1QBP02746 253 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 CTSBP07858 339 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 TACSTD2P09758 323 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 ARSBP15848 533 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 SPI1P17947 270 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 SLC6A1P30531 599 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 LTBRP36941 435 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 GABRA4P48169 554 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 MMP15P51511 669 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 PGDP52209 483 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 SLC25A1P53007 311 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 MAZP56270 477 aaKnown RBP9.55□□□□□ -0.88
CD44-210ENST00000434472 RPS4XP62701 263 aaKnown RBP9.55□□□□□ -0.88
CD44-210ENST00000434472 BTG2P78543 158 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 MAT1AQ00266 395 aaKnown RBP9.55□□□□□ -0.88
CD44-210ENST00000434472 CD83Q01151 205 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 MAB21L1Q13394 359 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 HSD17B12Q53GQ0 312 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 SSX6Q7RTT6 188 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 NUP54Q7Z3B4 507 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 KCTD20Q7Z5Y7 419 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 JAZF1Q86VZ6 243 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 PLCZ1Q86YW0 608 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 GPR135Q8IZ08 494 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 SLC7A5P1Q8MH63 180 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 ARL14Q8N4G2 192 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 NPEPL1Q8NDH3 523 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 FAM71CQ8NEG0 241 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 ADAMTS14Q8WXS8 1223 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 TRIM63Q969Q1 353 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 UPRTQ96BW1 309 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 MMABQ96EY8 250 aaPredicted RBP9.55□□□□□ -0.88
CD44-210ENST00000434472 DDOQ99489 341 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 SLC38A3Q99624 504 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 MAP3K3Q99759 626 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 TMEM246Q9BRR3 403 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 MRI1Q9BV20 369 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 GON7Q9BXV9 100 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 PPIL3Q9H2H8 161 aaKnown RBP9.55□□□□□ -0.88
CD44-210ENST00000434472 DPAGT1Q9H3H5 408 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 C12orf10Q9HB07 376 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 PDE7BQ9NP56 450 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 UBQLN4Q9NRR5 601 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 COPZ2Q9P299 210 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 FBXL4Q9UKA2 621 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 CAMK2AQ9UQM7 478 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 NUBP2Q9Y5Y2 271 aa9.55□□□□□ -0.88
CD44-210ENST00000434472 CHD9Q3L8U1 2897 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 TRBV2A0A0J9YWF9 115 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 FITM1A5D6W6 292 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 TLCD2A6NGC4 264 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 OR6C70A6NIJ9 312 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 C2CD4DB7Z1M9 353 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 LRRN3E7EW58 273 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 GNB5O14775 395 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 CTDSPLO15194 276 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 GSTZ1O43708 216 aaPredicted RBP9.54□□□□□ -0.88
CD44-210ENST00000434472 HYAL3O43820 417 aaPredicted RBP9.54□□□□□ -0.88
CD44-210ENST00000434472 IL33O95760 270 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 UBL4AP11441 157 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 EPXP11678 715 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 HPGDP15428 266 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 TCEA1P23193 301 aaKnown RBP9.54□□□□□ -0.88
CD44-210ENST00000434472 PPICP45877 212 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 OR10A3P58181 314 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 GRM7Q14831 915 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms