RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 SRFP11831 508 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 PEPDP12955 493 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 GP1BBP13224 206 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 CPEP16870 476 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 TGM1P22735 817 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 CDK10Q15131 360 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 ACSM3Q53FZ2 586 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 TMEM201Q5SNT2 666 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 MANEAQ5SRI9 462 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 IDO2Q6ZQW0 420 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 COMMD2Q86X83 199 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 GPALPP1Q8IXQ4 340 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 ZNF511Q8NB15 262 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 TSEN15Q8WW01 171 aaKnown RBP10.5□□□□□ -0.73
CLDN4-202ENST00000431918 HCAR1Q9BXC0 346 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 UBE2ZQ9H832 354 aaPredicted RBP10.5□□□□□ -0.73
CLDN4-202ENST00000431918 RASD1Q9Y272 281 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 DTX4Q9Y2E6 619 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 TRAV6A0A075B6T7 132 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
CLDN4-202ENST00000431918 RNF13O43567 381 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 PAHP00439 452 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 RENP00797 406 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 NIPAL3Q6P499 406 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 ZNF613Q6PF04 617 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 LSM14AQ8ND56 463 aaKnown RBP10.5□□□□□ -0.73
CLDN4-202ENST00000431918 OR13C5Q8NGS8 318 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 DAZLQ92904 295 aaKnown RBP10.5□□□□□ -0.73
CLDN4-202ENST00000431918 ANKRD9Q96BM1 317 aaPredicted RBP10.5□□□□□ -0.73
CLDN4-202ENST00000431918 FRMD6Q96NE9 622 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 SNX18Q96RF0 628 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 ZNF222Q9UK12 451 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 PILRAQ9UKJ1 303 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 DSPPQ9NZW4 1301 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 C2orf72A6NCS6 295 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 TLCD2A6NGC4 264 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 FLRT2O43155 660 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 LALBAP00709 142 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 CTBP2P56545 445 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 UBE2IP63279 158 aaKnown RBP10.5□□□□□ -0.73
CLDN4-202ENST00000431918 PSPHP78330 225 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 CCINQ13939 588 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 BAK1Q16611 211 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 ATAD3CQ5T2N8 411 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 WDR88Q6ZMY6 472 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 LINGO2Q7L985 606 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 BCORP1Q8N888 145 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 DNAJA4Q8WW22 397 aaPredicted RBP10.5□□□□□ -0.73
CLDN4-202ENST00000431918 SLC25A46Q96AG3 418 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 Q96M85 177 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 TSSK2Q96PF2 358 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 SLC25A18Q9H1K4 315 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 TCF7L1Q9HCS4 588 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 MED17Q9NVC6 651 aa10.5□□□□□ -0.73
CLDN4-202ENST00000431918 TNFSF14O43557 240 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 HIST1H1CP16403 213 aaKnown RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 RPS27P42677 84 aaKnown RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 MAP2K3P46734 347 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 RPS5P46782 204 aaKnown RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 EEF1A1P68104 462 aaKnown RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 ALG10Q5BKT4 473 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 PTCRAQ6ISU1 281 aaPredicted RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 MSANTD3Q96H12 275 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 ARHGAP9Q9BRR9 750 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 UBQLN4Q9NRR5 601 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 MRPL15Q9P015 296 aaKnown RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 LAMP5Q9UJQ1 280 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 MTCH2Q9Y6C9 303 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 A3GALT2U3KPV4 340 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 OPN1LWP04000 364 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 CAPZA2P47755 286 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 ZNF136P52737 540 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 FOXL2P58012 376 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 PSG6Q00889 435 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 CLVS2Q5SYC1 327 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 LYPD8Q6UX82 237 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 LINC00299Q6ZSB3 139 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 SYT13Q7L8C5 426 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 SLC35F2Q8IXU6 374 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 THAP4Q8WY91 577 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 GHSRQ92847 366 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 MSLNLQ96KJ4 702 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 BARHL1Q9BZE3 327 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 NXF5Q9H1B4 397 aaKnown RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 NARFLQ9H6Q4 476 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 C12orf10Q9HB07 376 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 PLSCR3Q9NRY6 295 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 NUFIP1Q9UHK0 495 aaKnown RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 ATXN7L1Q9ULK2 861 aaPredicted RBP10.49□□□□□ -0.73
CLDN4-202ENST00000431918 IGHV1OR15-9A0A0B4J2B8 117 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 ARL6IP5O75915 188 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 SBK2P0C263 348 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 TAS2R43P59537 309 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 ACTC1P68032 377 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 ACTA1P68133 377 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 CD300LDQ6UXZ3 194 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 DNAJC5GQ8N7S2 189 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 POMGNT2Q8NAT1 580 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 TM4SF19Q96DZ7 209 aa10.49□□□□□ -0.73
CLDN4-202ENST00000431918 SCARF2Q96GP6 870 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms