RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 RAB36O95755 333 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 MAS1P04201 325 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 RSPO4Q2I0M5 234 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-207ENST00000429896 SHFQ7M4L6 423 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 CNIH3Q8TBE1 160 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 NPRL2Q8WTW4 380 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 PRKAR1BP31321 381 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 PTGS2P35354 604 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 GLP1RP43220 463 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 PPIAP62937 165 aaKnown RBP11.92□□□□□ -0.5
PTCH1-207ENST00000429896 SLC35A1P78382 337 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 MC2RQ01718 297 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 PLGLAQ15195 96 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 ARHGAP11BQ3KRB8 267 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 ATAD3CQ5T2N8 411 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 TCTN3Q6NUS6 607 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 VN1R4Q7Z5H5 301 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 LIX1LQ8IVB5 337 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 SFTPA2Q8IWL1 248 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 OR52E2Q8NGJ4 325 aa11.92□□□□□ -0.5
PTCH1-207ENST00000429896 FTCDNL1E5RQL4 147 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 DPM1O60762 260 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 POU3F4P49335 361 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 GPR85P60893 370 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 GAB1Q13480 694 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 ADAMTS16Q8TE57 1224 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 THAP4Q8WY91 577 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 TMEM80Q96HE8 168 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 NRTNQ99748 197 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 RBM24Q9BX46 236 aaKnown RBP11.91□□□□□ -0.5
PTCH1-207ENST00000429896 TMED7-TICAM2A0A0A6YYA0 188 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 C2orf72A6NCS6 295 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 NR4A2P43354 598 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 CARD18P57730 90 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 RETREG3Q86VR2 466 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 MEX3DQ86XN8 651 aaKnown RBP11.91□□□□□ -0.5
PTCH1-207ENST00000429896 UCN3Q969E3 161 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 WWTR1Q9GZV5 400 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 DPAGT1Q9H3H5 408 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 NMNAT1Q9HAN9 279 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-207ENST00000429896 INIPQ9NRY2 104 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 TMED7Q9Y3B3 224 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 OR2W5A6NFC9 320 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 LRP3O75074 770 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 GTF2F2P13984 249 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 KCTD18Q6PI47 426 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-207ENST00000429896 C12orf43Q96C57 262 aaKnown RBP11.91□□□□□ -0.5
PTCH1-207ENST00000429896 MENTQ9BUN1 341 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 DEFB127Q9H1M4 99 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 TNFRSF12AQ9NP84 129 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 FAM118AQ9NWS6 357 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF337Q9Y3M9 751 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 A0A1B0GTL3 188 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 RASAL1O95294 804 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 PPP1R3DO95685 299 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 TIAL1Q01085 375 aaKnown RBP eCLIP11.91□□□□□ -0.5
PTCH1-207ENST00000429896 LIPKQ5VXJ0 399 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF836Q6ZNA1 936 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 CFAP77Q6ZQR2 320 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 FAM181AQ8N9Y4 354 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 OR2T4Q8NH00 348 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 BPIFA2Q96DR5 249 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 SLC35A4Q96G79 324 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 TEX37Q96LM6 180 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 LHPPQ9H008 270 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 CNIH4Q9P003 139 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 M0R129 80 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 EMP3P54852 163 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 RPS18P62269 152 aaKnown RBP11.91□□□□□ -0.5
PTCH1-207ENST00000429896 CXADRP78310 365 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 ZIC1Q15915 447 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 HBMQ6B0K9 141 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF709Q8N972 641 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 OR4K13Q8NH42 304 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 SGCZQ96LD1 299 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 TMEM38AQ9H6F2 299 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 SLC6A5Q9Y345 797 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 PCDHGA1Q9Y5H4 931 aa11.91□□□□□ -0.5
PTCH1-207ENST00000429896 METTL21EPA6NDL7 271 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 GM2AP17900 193 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 SQSTM1Q13501 440 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 C6orf183Q5T699 404 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF585AQ6P3V2 769 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 FBXO8Q9NRD0 319 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 MRPL33O75394 65 aaKnown RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 WDPCPO95876 746 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 CSNK1A1P48729 337 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 P2RX1P51575 399 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 TGFBR3Q03167 851 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 RELAQ04206 551 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 POU4F2Q12837 409 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 NKG7Q16617 165 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ZER1Q7Z7L7 766 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF431Q8TF32 576 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ASB4Q9Y574 426 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF850A8MQ14 1090 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 CDNFQ49AH0 187 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ACOT11Q8WXI4 607 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-207ENST00000429896 KCNK2O95069 426 aa11.9□□□□□ -0.5
PTCH1-207ENST00000429896 ZNF12P17014 697 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms