RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.38
SGMS1-203ENST00000429490 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.38
SGMS1-203ENST00000429490 MLXQ9UH92 298 aa12.71□□□□□ -0.38
SGMS1-203ENST00000429490 ECDO95905 644 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 ATP1B1P05026 303 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 HIST1H1CP16403 213 aaKnown RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 ARL4DP49703 201 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 SELENOPP49908 381 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 CTXN1P60606 82 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 SORDQ00796 357 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 TNK1Q13470 666 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 C1orf61Q13536 156 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 PDZD9Q8IXQ8 264 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 ZNF296Q8WUU4 475 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 WDR34Q96EX3 536 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 CENPMQ9NSP4 180 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 HEATR5BQ9P2D3 2071 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 A0A0A6YYD5 115 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 C5orf51A6NDU8 294 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 EIF1AYO14602 144 aaKnown RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 PRICKLE3O43900 615 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 GDI1P31150 447 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 RPL35P42766 123 aaKnown RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 EIF1AXP47813 144 aaKnown RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 ILF3Q12906 894 aaKnown RBP eCLIP12.7□□□□□ -0.383e-13■■■■■ 49.5
SGMS1-203ENST00000429490 AANATQ16613 207 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 FIGLAQ6QHK4 219 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 NDUFAF7Q7L592 441 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 TAF8Q7Z7C8 310 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 RELL2Q8NC24 303 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 SLC17A9Q9BYT1 436 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 ZBP1Q9H171 429 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 RDH16O75452 317 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 CFDP00746 253 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-203ENST00000429490 TPOP07202 933 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 EPXP11678 715 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 ZNF35P13682 527 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 CAPZA2P47755 286 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 ERVK-21P61565 698 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 RPL13AP3Q6NVV1 102 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 IDO2Q6ZQW0 420 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 ZNF227Q86WZ6 799 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 OR52R1Q8NGF1 315 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 SMARCD2Q92925 531 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 PEX11GQ96HA9 241 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 SEC22AQ96IW7 307 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 SLX1AQ9BQ83 275 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 PPA2Q9H2U2 334 aa12.7□□□□□ -0.38
SGMS1-203ENST00000429490 DCDC2BA2VCK2 349 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 OR2AT4A6NND4 320 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 CCL5P13501 91 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 SRMP19623 302 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 ITGB8P26012 769 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 KCNAB1Q14722 419 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 LGALSLQ3ZCW2 172 aaPredicted RBP12.69□□□□□ -0.38
SGMS1-203ENST00000429490 HLA-DQA1Q5Y7H0 255 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 LAMTOR1Q6IAA8 161 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 TMEM64Q6YI46 380 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 C17orf107Q6ZR85 190 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 NLRC3Q7RTR2 1065 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 GALNTL5Q7Z4T8 443 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 CDRT4Q8N9R6 151 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 OR2T4Q8NH00 348 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 OR5AK2Q8NH90 309 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 YIPF5Q969M3 257 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 SLC22A18Q96BI1 424 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 TRIM43Q96BQ3 446 aaPredicted RBP12.69□□□□□ -0.38
SGMS1-203ENST00000429490 LHX9Q9NQ69 397 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 PRDM7Q9NQW5 492 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 CMC2Q9NRP2 79 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 C14orf105Q9NVL8 296 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 SDHAF2Q9NX18 166 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 INSL6Q9Y581 213 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 KANTRA0A1W2PQU2 76 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 MCIDASD6RGH6 385 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 IFNA6P05013 189 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 DNASE1L1P49184 302 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 ZNF77Q15935 545 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 RPE65Q16518 533 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 SFRP5Q5T4F7 317 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 BEST3Q8N1M1 668 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 ARMC10Q8N2F6 343 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 MRPL43Q8N983 215 aaKnown RBP12.69□□□□□ -0.38
SGMS1-203ENST00000429490 ANGPTL6Q8NI99 470 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 HERVK_113Q902F9 699 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 OR2M4Q96R27 311 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 SLC7A5P2Q9GIP4 190 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 SLC6A15Q9H2J7 730 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 Q9N2J8 555 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 WASH6PQ9NQA3 447 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 PRSS16Q9NQE7 514 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 SLC39A1Q9NY26 324 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 GRHPRQ9UBQ7 328 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 CKLFQ9UBR5 152 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 ZNF346Q9UL40 294 aaKnown RBP12.69□□□□□ -0.38
SGMS1-203ENST00000429490 ATXN7L1Q9ULK2 861 aaPredicted RBP12.69□□□□□ -0.38
SGMS1-203ENST00000429490 SPARCP09486 303 aa12.69□□□□□ -0.38
SGMS1-203ENST00000429490 AKR1C2P52895 323 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms