RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 ITGADQ13349 1161 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 DHDDSQ86SQ9 333 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 PIGXQ8TBF5 258 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 IGFBPL1Q8WX77 278 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 KISS1RQ969F8 398 aaPredicted RBP16.93■□□□□ 0.3
COL9A2-204ENST00000427563 PLPPR2Q96GM1 343 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 PRR14Q9BWN1 585 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 HDHD5Q9BXW7 423 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 RABEP2Q9H5N1 569 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 TMEM38AQ9H6F2 299 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 UBTD1Q9HAC8 227 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 KLHL14Q9P2G3 628 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.93■□□□□ 0.3
COL9A2-204ENST00000427563 ADAM21Q9UKJ8 722 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 FLVCR1Q9Y5Y0 555 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 CADP27708 2225 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 ACANP16112 2415 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 UQCRBP14927 111 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 IL32P24001 234 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 CXCR1P25024 350 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 ADSLP30566 484 aaPredicted RBP16.92■□□□□ 0.3
COL9A2-204ENST00000427563 PRKAR1BP31321 381 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 MAP2K6P52564 334 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 MTPNP58546 118 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 ADAM8P78325 824 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 SLC35A1P78382 337 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 EGR4Q05215 589 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 CEACAM7Q14002 265 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 SCARB2Q14108 478 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 SLC17A1Q14916 467 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 P2RY6Q15077 328 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 OR7A5Q15622 319 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 ACKR1Q16570 336 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 ZSWIM7Q19AV6 140 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 REEP3Q6NUK4 255 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 DHRS4L2Q6PKH6 230 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 PAQR6Q6TCH4 344 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 BHLHA15Q7RTS1 189 aaPredicted RBP16.92■□□□□ 0.3
COL9A2-204ENST00000427563 TGIF2LYQ8IUE0 185 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 TMEM99Q8N816 258 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 ZIC4Q8N9L1 334 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 LILRB1Q8NHL6 650 aaPredicted RBP16.92■□□□□ 0.3
COL9A2-204ENST00000427563 ZHX1-C8orf76Q96EF9 292 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 ANKRD27Q96NW4 1050 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 CGREF1Q99674 301 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 PTDSS2Q9BVG9 487 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 NSRP1Q9H0G5 558 aaKnown RBP16.92■□□□□ 0.3
COL9A2-204ENST00000427563 FANCFQ9NPI8 374 aa16.92■□□□□ 0.3
COL9A2-204ENST00000427563 NOSIPQ9Y314 301 aaKnown RBP16.92■□□□□ 0.3
COL9A2-204ENST00000427563 C5orf58C9J3I9 102 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 TPST2O60704 377 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 SHOX2O60902 331 aaPredicted RBP16.91■□□□□ 0.3
COL9A2-204ENST00000427563 AKR7A3O95154 331 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 IDUAP35475 653 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 PCBP3P57721 371 aaKnown RBP16.91■□□□□ 0.3
COL9A2-204ENST00000427563 ALKBH2Q6NS38 261 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 ZNF704Q6ZNC4 412 aaPredicted RBP16.91■□□□□ 0.3
COL9A2-204ENST00000427563 ZNF433Q8N7K0 673 aaPredicted RBP16.91■□□□□ 0.3
COL9A2-204ENST00000427563 C10orf82Q8WW14 230 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 SLC35B4Q969S0 331 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 FAM107BQ9H098 131 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 EMC3Q9P0I2 261 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 PRDM4Q9UKN5 801 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 NDUFAF1Q9Y375 327 aa16.91■□□□□ 0.3
COL9A2-204ENST00000427563 A8MVM7 634 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 FTCDNL1E5RQL4 147 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 PDLIM1O00151 329 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 AQP1P29972 269 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 HOXC12P31275 282 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 GZMMP51124 257 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 ARFIP2P53365 341 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 COPZ1P61923 177 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 DMTNQ08495 405 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 FOXD4Q12950 439 aaPredicted RBP16.9■□□□□ 0.3
COL9A2-204ENST00000427563 CAPRIN1Q14444 709 aaKnown RBP16.9■□□□□ 0.3
COL9A2-204ENST00000427563 OTUD3Q5T2D3 398 aaPredicted RBP16.9■□□□□ 0.3
COL9A2-204ENST00000427563 C1orf140Q5VVS0 124 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 METTL21CQ5VZV1 264 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 FBXW9Q5XUX1 488 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 C6orf89Q6UWU4 347 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 ZNF100Q8IYN0 542 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 WFDC11Q8NEX6 87 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 OR52E4Q8NGH9 312 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 TSPEARQ8WU66 669 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 APH1AQ96BI3 265 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 DLL4Q9NR61 685 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 BEX4Q9NWD9 120 aaPredicted RBP16.9■□□□□ 0.3
COL9A2-204ENST00000427563 NPAP1Q9NZP6 1156 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 EDARQ9UNE0 448 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 TRIM33Q9UPN9 1127 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 ARID1AO14497 2285 aa16.9■□□□□ 0.3
COL9A2-204ENST00000427563 IGKV1D-42A0A075B6H8 117 aa16.89■□□□□ 0.29
COL9A2-204ENST00000427563 A0A1B0GWA3 101 aa16.89■□□□□ 0.29
COL9A2-204ENST00000427563 AQP7P3A6NL99 342 aa16.89■□□□□ 0.29
COL9A2-204ENST00000427563 EVPLLA8MZ36 301 aa16.89■□□□□ 0.29
COL9A2-204ENST00000427563 GPR171O14626 319 aa16.89■□□□□ 0.29
COL9A2-204ENST00000427563 EIF1BO60739 113 aaKnown RBP16.89■□□□□ 0.29
COL9A2-204ENST00000427563 FZD7O75084 574 aa16.89■□□□□ 0.29
COL9A2-204ENST00000427563 MFN2O95140 757 aa16.89■□□□□ 0.29
COL9A2-204ENST00000427563 CNOT4O95628 575 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms