RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 STAT5AP42229 794 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 OR3A3P47888 321 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 BIKQ13323 160 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 ZNF628Q5EBL2 1059 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 BEX5Q5H9J7 111 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 LEG1Q6P5S2 330 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 OR52B4Q8NGK2 314 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 RIT1Q92963 219 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 LIPT1Q9Y234 373 aa12.33□□□□□ -0.44
USP42-203ENST00000426246 CRYZL1O95825 349 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 TCRBP04435 133 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 ATF1P18846 271 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 HTR1FP30939 366 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 GBX2P52951 348 aaPredicted RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 FBXW4P57775 412 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 SF3A2Q15428 464 aaKnown RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 BCL2A1Q16548 175 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 HSD17B12Q53GQ0 312 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 PXDC1Q5TGL8 231 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 CSNK1A1LQ8N752 337 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 TSEN15Q8WW01 171 aaKnown RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 MMABQ96EY8 250 aaPredicted RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 MRGPRX1Q96LB2 322 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 Q96M85 177 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 FBRSQ9HAH7 460 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 LRIT1Q9P2V4 623 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 FARSAQ9Y285 508 aaKnown RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 CASC3O15234 703 aaKnown RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 IFNGP01579 166 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 ANXA7P20073 488 aaKnown RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 F8A1P23610 371 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 GFOD2Q3B7J2 385 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 TMEM35AQ53FP2 167 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 AKIRIN2Q53H80 203 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 AADACL4Q5VUY2 407 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 ZPLD1Q8TCW7 415 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 DDOQ99489 341 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 TPSD1Q9BZJ3 242 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 TCF7L1Q9HCS4 588 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 ERVK-19Q9WJR5 959 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 CACNA1GO43497 2377 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 PRICKLE3O43900 615 aaPredicted RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 ZNF250P15622 560 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 IGFBP4P22692 258 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 HSD17B2P37059 387 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 AQP2P41181 271 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 SNTA1Q13424 505 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 FBXO42Q6P3S6 717 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 DGAT2L6Q6ZPD8 337 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 RPLP0P6Q8NHW5 317 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 C8orf33Q9H7E9 229 aaPredicted RBP12.32□□□□□ -0.44
USP42-203ENST00000426246 WASH6PQ9NQA3 447 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 MGAT4CQ9UBM8 478 aa12.32□□□□□ -0.44
USP42-203ENST00000426246 IRGMA1A4Y4 181 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 MCIDASD6RGH6 385 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 ARPC5O15511 151 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 SBK2P0C263 348 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 ERGP11308 486 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 C21orf58P58505 322 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 MRPS21P82921 87 aaKnown RBP12.31□□□□□ -0.44
USP42-203ENST00000426246 ARHGAP19Q14CB8 494 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 APOOLQ6UXV4 268 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 RSC1A1Q92681 617 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 WDR34Q96EX3 536 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 RNF170Q96K19 258 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 SF3B6Q9Y3B4 125 aaKnown RBP12.31□□□□□ -0.44
USP42-203ENST00000426246 OR6A2O95222 327 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 UGT2B7P16662 529 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 TNFAIP8L1Q8WVP5 186 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 ACTR10Q9NZ32 417 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 KCNE5Q9UJ90 142 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 SLC17A4Q9Y2C5 497 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 ANXA2P2A6NMY6 339 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 CDC40O60508 579 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP42-203ENST00000426246 GMDSO60547 372 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 WNT1P04628 370 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 ANXA2P07355 339 aaKnown RBP12.31□□□□□ -0.44
USP42-203ENST00000426246 TFPIP10646 304 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 ANXA3P12429 323 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 FPR3P25089 353 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 PKLRP30613 574 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 GDNFP39905 211 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 SMAD4Q13485 552 aaKnown RBP12.31□□□□□ -0.44
USP42-203ENST00000426246 FAM53BQ14153 422 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 USP53Q70EK8 1073 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 JAZF1Q86VZ6 243 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 COMMD2Q86X83 199 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 CCDC28AQ8IWP9 274 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 OR2L8Q8NGY9 312 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
USP42-203ENST00000426246 ELMOD3Q96FG2 381 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 SCARF2Q96GP6 870 aaPredicted RBP12.31□□□□□ -0.44
USP42-203ENST00000426246 HEATR5AQ86XA9 2040 aa12.31□□□□□ -0.44
USP42-203ENST00000426246 ELOA3DA6NLF2 546 aaPredicted RBP12.3□□□□□ -0.44
USP42-203ENST00000426246 GPR89AB7ZAQ6 455 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms