RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 A0A0A6YYC8 382 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 FAM171A2A8MVW0 826 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 I3L1I5 382 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 MT-ND5P03915 603 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 HMGN2P05204 90 aaKnown RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 KLK3P07288 261 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 PRF1P14222 555 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 GALP22466 123 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 TEAD1P28347 426 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 SOX2P48431 317 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 DLX5P56178 289 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 FUT5Q11128 374 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 DYRK1AQ13627 763 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 TRAM2Q15035 370 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 AVPI1Q5T686 147 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 CYB5R2Q6BCY4 276 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 MRM1Q6IN84 353 aaKnown RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 USP53Q70EK8 1073 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 TAS1R1Q7RTX1 841 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 CCDC116Q8IYX3 515 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 SVBPQ8N300 66 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 LNX2Q8N448 690 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 PFN4Q8NHR9 129 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 RAD51AP1Q96B01 352 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 RHOVQ96L33 236 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 BBS4Q96RK4 519 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 SLITRK2Q9H156 845 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 GPN1Q9HCN4 374 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 A4GALTQ9NPC4 353 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 NOX4Q9NPH5 578 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 SLC13A4Q9UKG4 626 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 EXOGQ9Y2C4 368 aaKnown RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 GON4LQ3T8J9 2241 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 HEATR5BQ9P2D3 2071 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 GP1BAP07359 652 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 GKN3PP0CG01 181 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ZNF3P17036 446 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 GSTM3P21266 225 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 P2RX1P51575 399 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 NR0B1P51843 470 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 PNLIPRP1P54315 467 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 FNDC3BQ53EP0 1204 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 FAM199XQ6PEV8 388 aaPredicted RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 THSD4Q6ZMP0 1018 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 IKBIPQ70UQ0 350 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 NAA40Q86UY6 237 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 FAM98AQ8NCA5 519 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TMIEQ8NEW7 156 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 OR10R2Q8NGX6 335 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ISOC2Q96AB3 205 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 MRPS30Q9NP92 439 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 P2RX2Q9UBL9 471 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 SLC7A7Q9UM01 511 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 A0A1B0GW55 424 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 SYT5O00445 386 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 RAD1O60671 282 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 PAK4O96013 591 aaPredicted RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 DUX4L2P0CJ85 424 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 DUX4L3P0CJ86 424 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 DUX4L4P0CJ87 422 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 DUX4L5P0CJ88 424 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 DUX4L6P0CJ89 424 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 DUX4L7P0CJ90 424 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 CKBP12277 381 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 CPN1P15169 458 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 PSMB5P28074 263 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ACSM1Q08AH1 577 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 FABP9Q0Z7S8 132 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 STX4Q12846 297 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 SMCO1Q147U7 214 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 OTPQ5XKR4 325 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 LHX8Q68G74 356 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 CDPF1Q6NVV7 123 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 OR6V1Q8N148 313 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 PIGXQ8TBF5 258 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TRMT2BQ96GJ1 504 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TEAD3Q99594 435 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 PAPOLGQ9BWT3 736 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TSPAN10Q9H1Z9 355 aaPredicted RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 MYNNQ9NPC7 610 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ANKRD10Q9NXR5 420 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 RASL12Q9NYN1 266 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 DUX4Q9UBX2 424 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ATXN7L1Q9ULK2 861 aaPredicted RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TRAV14DV4A0A0A6YYC5 116 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 SLC38A8A6NNN8 435 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TMPRSS11DO60235 418 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ANXA2P07355 339 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 FBP1P09467 338 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 PPP2R1BP30154 601 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 GMFBP60983 142 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 SMAD3P84022 425 aaKnown RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 SHC2P98077 582 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 ZNF85Q03923 595 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 NDUFA9Q16795 377 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TXNDC8Q6A555 127 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 NIPAL3Q6P499 406 aa10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 TMEM173Q86WV6 379 aaPredicted RBP10.41□□□□□ -0.74
SEC61A1-202ENST00000424880 SPAG16Q8N0X2 631 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms