RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DCTN4Q9UJW0 460 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 TRAPPC4Q9Y296 219 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 ATP23Q9Y6H3 246 aa14.19□□□□□ -0.14
COL18A1-205ENST00000423214 HMGN4O00479 90 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 ZNF208O43345 1280 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 KITP10721 976 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 SLC25A16P16260 332 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 NME5P56597 212 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 PHC1P78364 1004 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 PLAURQ03405 335 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 TMEM249Q2WGJ8 235 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 LRRC34Q8IZ02 419 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 ZNF525Q8N782 197 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 C1orf162Q8NEQ5 155 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-205ENST00000423214 FAM168AQ92567 244 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 HTRA1Q92743 480 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 TLCD1Q96CP7 247 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 TRNT1Q96Q11 434 aaKnown RBP14.18□□□□□ -0.14
COL18A1-205ENST00000423214 PANX1Q96RD7 426 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 INPP5KQ9BT40 448 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 C1QTNF6Q9BXI9 259 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 SLC38A1Q9H2H9 487 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 BTNL2Q9UIR0 455 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 FLVCR1Q9Y5Y0 555 aa14.18□□□□□ -0.14
COL18A1-205ENST00000423214 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.17□□□□□ -0.141e-9■■□□□ 11.7
COL18A1-205ENST00000423214 TMEM72A0PK05 275 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 AGAP5A6NIR3 686 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 H7C417 338 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 CHRM4P08173 479 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 CSF3P09919 207 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 NR2F1P10589 423 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 IL7RP16871 459 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 TACR3P29371 465 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 FOXG1P55316 489 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-205ENST00000423214 TXNL4AP83876 142 aaKnown RBP14.17□□□□□ -0.14
COL18A1-205ENST00000423214 CHRNB3Q05901 458 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 SYPL1Q16563 259 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 OTUD3Q5T2D3 398 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-205ENST00000423214 MRPL2Q5T653 305 aaKnown RBP14.17□□□□□ -0.14
COL18A1-205ENST00000423214 PAQR6Q6TCH4 344 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 ANKFN1Q8N957 763 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 ZG16BQ96DA0 208 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 CCDC115Q96NT0 180 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 MUS81Q96NY9 551 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 TNFRSF13CQ96RJ3 184 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 AMBRA1Q9C0C7 1298 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 WDR55Q9H6Y2 383 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-205ENST00000423214 MANSC1Q9H8J5 431 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 MEAF6Q9HAF1 191 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 SLC17A5Q9NRA2 495 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 SLC7A10Q9NS82 523 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 NKIRAS1Q9NYS0 192 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 OSGIN1Q9UJX0 560 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 CDC42EP3Q9UKI2 254 aa14.17□□□□□ -0.14
COL18A1-205ENST00000423214 PRAMEF27A3QJZ7 478 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 CFAP73A6NFT4 308 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 CCDC154A6NI56 674 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 SDHDO14521 159 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 GPRIN2O60269 458 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 WNT11O96014 354 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 DBIP07108 87 aaKnown RBP14.16□□□□□ -0.14
COL18A1-205ENST00000423214 ALDOCP09972 364 aaKnown RBP14.16□□□□□ -0.14
COL18A1-205ENST00000423214 IMPDH2P12268 514 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 NTF4P34130 210 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 SLC1A3P43003 542 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 MAP2K6P52564 334 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 H3F3AP84243 136 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 LRRC74AQ0VAA2 488 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 SLC17A1Q14916 467 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 TSPO2Q5TGU0 170 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 LRRC74BQ6ZQY2 392 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 ABHD12BQ7Z5M8 362 aaPredicted RBP14.16□□□□□ -0.14
COL18A1-205ENST00000423214 PEX5LQ8IYB4 626 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 ZNF440Q8IYI8 595 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 OR10H5Q8NGA6 315 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 PNPT1Q8TCS8 783 aaKnown RBP14.16□□□□□ -0.14
COL18A1-205ENST00000423214 ZBTB18Q99592 522 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 THAP1Q9NVV9 213 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 PMF1-BGLAPU3KQ54 211 aa14.16□□□□□ -0.14
COL18A1-205ENST00000423214 A0A096LNT2 108 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 ZC3H12DA2A288 527 aaKnown RBP14.15□□□□□ -0.14
COL18A1-205ENST00000423214 ELOA3DA6NLF2 546 aaPredicted RBP14.15□□□□□ -0.14
COL18A1-205ENST00000423214 ATP6V1G2-DDX39BF2Z307 99 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 PDLIM1O00151 329 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 FAAHO00519 579 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 SNNO75324 88 aaPredicted RBP14.15□□□□□ -0.14
COL18A1-205ENST00000423214 KRT33AO76009 404 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 GPIP06744 558 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 CDH2P19022 906 aaPredicted RBP14.15□□□□□ -0.14
COL18A1-205ENST00000423214 RPS4Y1P22090 263 aaKnown RBP14.15□□□□□ -0.14
COL18A1-205ENST00000423214 CXCR1P25024 350 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 EPHA3P29320 983 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 MPGP29372 298 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 SLC18A1P54219 525 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 UFM1P61960 85 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 VLDLRP98155 873 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 SLC25A3Q00325 362 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 LOXL1Q08397 574 aaPredicted RBP14.15□□□□□ -0.14
COL18A1-205ENST00000423214 EPS8Q12929 822 aa14.15□□□□□ -0.14
COL18A1-205ENST00000423214 OR7A5Q15622 319 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms