RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 CALCRP30988 508 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 RFC4P35249 363 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 RPL13AP40429 203 aaKnown RBP2.34□□□□□ -2.03
LINC00397-201ENST00000422074 SSR1P43307 286 aaKnown RBP2.34□□□□□ -2.03
LINC00397-201ENST00000422074 APOC4P55056 127 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 SELENOTP62341 195 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 SPIBQ01892 262 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 MAP2K1Q02750 393 aaPredicted RBP2.34□□□□□ -2.03
LINC00397-201ENST00000422074 FGL1Q08830 312 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 NCBP1Q09161 790 aaKnown RBP2.34□□□□□ -2.03
LINC00397-201ENST00000422074 RIPK1Q13546 671 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 NSDHLQ15738 373 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 SAMD4BQ5PRF9 694 aaKnown RBP2.34□□□□□ -2.03
LINC00397-201ENST00000422074 C1orf146Q5VVC0 180 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 PMF1Q6P1K2 205 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 DCAF4L2Q8NA75 395 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 ZNF540Q8NDQ6 660 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 OR2T3Q8NH03 318 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 OR56B4Q8NH76 319 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 C7orf33Q8WU49 177 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 RPRD1AQ96P16 312 aaPredicted RBP2.34□□□□□ -2.03
LINC00397-201ENST00000422074 NRTNQ99748 197 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 RAB34Q9BZG1 259 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 APMAPQ9HDC9 416 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 SIGLEC8Q9NYZ4 499 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 PIPOXQ9P0Z9 390 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 PTBP2Q9UKA9 531 aaKnown RBP2.34□□□□□ -2.03
LINC00397-201ENST00000422074 V9GY05 133 aa2.34□□□□□ -2.03
LINC00397-201ENST00000422074 RPAP1Q9BWH6 1393 aaPredicted RBP2.34□□□□□ -2.04
LINC00397-201ENST00000422074 PLEKHH1Q9ULM0 1364 aa2.34□□□□□ -2.04
LINC00397-201ENST00000422074 SCN2AQ99250 2005 aa2.34□□□□□ -2.04
LINC00397-201ENST00000422074 USP27XA6NNY8 438 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 IDSB3KWA1 339 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 RGS16O15492 202 aaPredicted RBP2.33□□□□□ -2.04
LINC00397-201ENST00000422074 TAPBPO15533 448 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 SNAI2O43623 268 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 ATP5LO75964 103 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 KLF8O95600 359 aaPredicted RBP2.33□□□□□ -2.04
LINC00397-201ENST00000422074 IQCF3P0C7M6 154 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 TOP1P11387 765 aaKnown RBP2.33□□□□□ -2.04
LINC00397-201ENST00000422074 COX5AP20674 150 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 GNA11P29992 359 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 GPM6AP51674 278 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 NUP107P57740 925 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 PRPS1P60891 318 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 NSUN5P1Q3KNT7 163 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 DMRTC1Q5HYR2 192 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 PAGE3Q5JUK9 113 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 ZNF691Q5VV52 312 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 TIGD3Q6B0B8 471 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 VSTM4Q8IW00 320 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 ARL6IP6Q8N6S5 226 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 FGF11Q92914 225 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 UCN3Q969E3 161 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 STARD4Q96DR4 205 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 TRIM44Q96DX7 344 aaPredicted RBP2.33□□□□□ -2.04
LINC00397-201ENST00000422074 CLCC1Q96S66 551 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 CCNL2Q96S94 520 aaPredicted RBP2.33□□□□□ -2.04
LINC00397-201ENST00000422074 HIST1H4GQ99525 98 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 CCT7Q99832 543 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 KLHDC3Q9BQ90 382 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 ZNF670Q9BS34 389 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 ZSCAN5AQ9BUG6 496 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 SELENOIQ9C0D9 397 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 VCX2Q9H322 139 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 REEP4Q9H6H4 257 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 SLC25A22Q9H936 323 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 FOLH1BQ9HBA9 442 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 RAB18Q9NP72 206 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 AIG1Q9NVV5 245 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 RASD1Q9Y272 281 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 ASF1AQ9Y294 204 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 MEMO1Q9Y316 297 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 SH3TC1Q8TE82 1336 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 PLEKHG1Q9ULL1 1385 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 FRMPD3Q5JV73 1810 aa2.33□□□□□ -2.04
LINC00397-201ENST00000422074 A0A0G2JRQ6 117 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 IQANK1A0A1B0GTG1 560 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 A6NIZ1 184 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 A8MUA0 341 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 A8MXQ7 604 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 F5H6K3 240 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 DCTN6O00399 190 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 ZNF208O43345 1280 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 MED7O43513 233 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 KLK3P07288 261 aaPredicted RBP2.32□□□□□ -2.04
LINC00397-201ENST00000422074 DBTP11182 482 aaKnown RBP2.32□□□□□ -2.04
LINC00397-201ENST00000422074 ABOP16442 354 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 GLRA2P23416 452 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 MMP11P24347 488 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 HTR1FP30939 366 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 RAP1BP61224 184 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 TGFBR3Q03167 851 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 KLRC3Q07444 240 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 SLC15A2Q16348 729 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 EXOC3L2Q2M3D2 409 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 ZSCAN25Q6NSZ9 544 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 TMIGD1Q6UXZ0 262 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 Q6ZN92 141 aa2.32□□□□□ -2.04
LINC00397-201ENST00000422074 RNF165Q6ZSG1 346 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms