RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 GUCY1A3Q02108 690 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 CEACAM7Q14002 265 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 SCARB2Q14108 478 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 KEAP1Q14145 624 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 SLC17A1Q14916 467 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 GLIPR1L2Q4G1C9 344 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 DHDDSQ86SQ9 333 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 COMTD1Q86VU5 262 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 LSRQ86X29 649 aaPredicted RBP13.12□□□□□ -0.31
LINC01840-201ENST00000421870 HIPK4Q8NE63 616 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 BHLHE22Q8NFJ8 381 aaPredicted RBP13.12□□□□□ -0.31
LINC01840-201ENST00000421870 STK35Q8TDR2 534 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 HSD17B8Q92506 261 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 HS3ST6Q96QI5 342 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 ZNF607Q96SK3 696 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 KAT8Q9H7Z6 458 aaKnown RBP13.12□□□□□ -0.31
LINC01840-201ENST00000421870 EVA1AQ9H8M9 152 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 C12orf10Q9HB07 376 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 SAR1AQ9NR31 198 aa13.12□□□□□ -0.31
LINC01840-201ENST00000421870 NOSIPQ9Y314 301 aaKnown RBP13.12□□□□□ -0.31
LINC01840-201ENST00000421870 VPS13CQ709C8 3753 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 ZNF469Q96JG9 3925 aaPredicted RBP13.11□□□□□ -0.31
LINC01840-201ENST00000421870 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
LINC01840-201ENST00000421870 PRORSD1PA6NEY8 169 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 FRS3O43559 492 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 SERPINB7O75635 380 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 VIMP08670 466 aaKnown RBP13.11□□□□□ -0.31
LINC01840-201ENST00000421870 COX5AP20674 150 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 IGHV1-2P23083 117 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 ADSLP30566 484 aaPredicted RBP13.11□□□□□ -0.31
LINC01840-201ENST00000421870 IDUAP35475 653 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 GZMMP51124 257 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 HOXC5Q00444 222 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 BNIP2Q12982 314 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 KLF10Q13118 480 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 SELPLGQ14242 412 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 TSC22D1Q15714 1073 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 DEFB113Q30KQ7 82 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 HSP90B2PQ58FF3 399 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 FBXW9Q5XUX1 488 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 C6orf89Q6UWU4 347 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 NET1Q7Z628 596 aaPredicted RBP13.11□□□□□ -0.31
LINC01840-201ENST00000421870 ZNF100Q8IYN0 542 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 TMEM99Q8N816 258 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 KISS1RQ969F8 398 aaPredicted RBP13.11□□□□□ -0.31
LINC01840-201ENST00000421870 TMEM204Q9BSN7 226 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 SF3B5Q9BWJ5 86 aaKnown RBP13.11□□□□□ -0.31
LINC01840-201ENST00000421870 PIF1Q9H611 641 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
LINC01840-201ENST00000421870 AQP7P3A6NL99 342 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 MRPL33O75394 65 aaKnown RBP13.1□□□□□ -0.31
LINC01840-201ENST00000421870 NPPAP01160 153 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 IL32P24001 234 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 HTR2AP28223 471 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
LINC01840-201ENST00000421870 P2RY4P51582 365 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 NR1H2P55055 460 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 MTPNP58546 118 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 EGR4Q05215 589 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 NFYCQ13952 458 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 OR7A5Q15622 319 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 TAB1Q15750 504 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 ACKR1Q16570 336 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 COQ5Q5HYK3 327 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 OTUD3Q5T2D3 398 aaPredicted RBP13.1□□□□□ -0.31
LINC01840-201ENST00000421870 C1orf140Q5VVS0 124 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 NANOGP8Q6NSW7 305 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 BHLHA15Q7RTS1 189 aaPredicted RBP13.1□□□□□ -0.31
LINC01840-201ENST00000421870 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.1□□□□□ -0.31
LINC01840-201ENST00000421870 P2RY8Q86VZ1 359 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 ZNF433Q8N7K0 673 aaPredicted RBP13.1□□□□□ -0.31
LINC01840-201ENST00000421870 ZIC4Q8N9L1 334 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 MFSD8Q8NHS3 518 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 APH1AQ96BI3 265 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 ZNF317Q96PQ6 595 aaPredicted RBP13.1□□□□□ -0.31
LINC01840-201ENST00000421870 PIP5K1AQ99755 562 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 TRIM2Q9C040 744 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 NANOGQ9H9S0 305 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 PARPBPQ9NWS1 579 aa13.1□□□□□ -0.31
LINC01840-201ENST00000421870 ITPR3Q14573 2671 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 MAP1AP78559 2803 aaPredicted RBP13.09□□□□□ -0.31
LINC01840-201ENST00000421870 FTCDNL1E5RQL4 147 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 M0QX08 132 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 TPST2O60704 377 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 FZD7O75084 574 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 LYZL6O75951 148 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 AKR7A3O95154 331 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 VAMP5O95183 116 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 LGI1O95970 557 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 C8BP07358 591 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 DMTNQ08495 405 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 CYLC2Q14093 348 aaPredicted RBP13.09□□□□□ -0.31
LINC01840-201ENST00000421870 DUSP7Q16829 419 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 FAM91A1Q658Y4 838 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 SEZ6L2Q6UXD5 910 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 SSX8Q7RTT4 187 aa13.09□□□□□ -0.31
LINC01840-201ENST00000421870 WFDC8Q8IUA0 241 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms