RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TRAPPC2BP0DI82 140 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 HSD11B1LQ7Z5J1 315 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 MZB1Q8WU39 189 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 RSC1A1Q92681 617 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 TANKQ92844 425 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 GSX2Q9BZM3 304 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 VDAC3Q9Y277 283 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 A3GALT2U3KPV4 340 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 RPE65Q16518 533 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 ARSJQ5FYB0 599 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 HENMT1Q5T8I9 393 aaKnown RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM151BQ8IW70 566 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 NLGN4YQ8NFZ3 816 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 ISL2Q96A47 359 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 HAO2Q9NYQ3 351 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 SLC35A3Q9Y2D2 325 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 C17orf105B2RV13 164 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 B4DXG7 233 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 SMAD6O43541 496 aaKnown RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 JUNDP17535 347 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 ADRA1AP35348 466 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 EFNA3P52797 238 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 MFGE8Q08431 387 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 PLPP5Q8NEB5 264 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 SLC38A5Q8WUX1 472 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 OR11A1Q9GZK7 315 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 OR10A5Q9H207 317 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 OR10A2Q9H208 303 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 ARNT2Q9HBZ2 717 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 NOX4Q9NPH5 578 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 A0A087WZY1 265 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 VASPP50552 380 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 TLE4Q04727 773 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 CST6Q15828 149 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 STEAP1BQ6NZ63 245 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 GDPD3Q7L5L3 318 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 OR10Z1Q8NGY1 313 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 C20orf24Q9BUV8 137 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 MON2Q7Z3U7 1717 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 ZNF780AO75290 641 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 CR2P20023 1033 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 AOAHP28039 575 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 PDZK1IP1Q13113 114 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 CNN3Q15417 329 aaKnown RBP11.52□□□□□ -0.57
CLCN4-203ENST00000421085 H3F3CQ6NXT2 135 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 PRSS45Q7RTY3 260 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 KANSL1Q7Z3B3 1105 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 ZNF439Q8NDP4 499 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 HPSE2Q8WWQ2 592 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 YIPF5Q969M3 257 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 ZIC5Q96T25 663 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 PLEK2Q9NYT0 353 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 B4GALT7Q9UBV7 327 aa11.52□□□□□ -0.57
CLCN4-203ENST00000421085 CHD2O14647 1828 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 IGKV6D-21A0A0A0MT36 114 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 WASH4PA8MWX3 477 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 M0QYG6 137 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 SCGB2A1O75556 95 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 F13BP05160 661 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 GP2P55259 537 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 HHEXQ03014 270 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ACSM1Q08AH1 577 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 HEPHL1Q6MZM0 1159 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ASB11Q8WXH4 323 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ASB17Q8WXJ9 295 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 TAAR8Q969N4 342 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 PDLIM5Q96HC4 596 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 SFXN2Q96NB2 322 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 LMF2Q9BU23 707 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 STARD5Q9NSY2 213 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 PRAMEF27A3QJZ7 478 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 OR52A4PA6NMU1 304 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 AGAP14A8MT82 685 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ADAM12O43184 909 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 SULT1B1O43704 296 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 DUX1O43812 170 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ANXA7P20073 488 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 HTR2CP28335 458 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 XCR1P46094 333 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 SUOXP51687 545 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 BTG1P62324 171 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 SRYQ05066 204 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 PDE7AQ13946 482 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ZNF74Q16587 644 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ACTBL2Q562R1 376 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 PRAMEF9Q5VWM5 478 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 KDM4DQ6B0I6 523 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 MRPL21Q7Z2W9 205 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 FUNDC1Q8IVP5 155 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 DDOQ99489 341 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 TRDV1A0A1B0GX56 115 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 CEBPZOSA8MTT3 80 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 CPNE6O95741 557 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ELK1P19419 428 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 FLI1Q01543 452 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms