RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 EPS8Q12929 822 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 MRPL2Q5T653 305 aaKnown RBP15.18■□□□□ 0.02
PTCD1-202ENST00000419981 C9orf135Q5VTT2 229 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 CLEC2AQ6UVW9 174 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 B3GLCTQ6Y288 498 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 ZNF621Q6ZSS3 439 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 C17orf78Q8N4C9 275 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 C1orf162Q8NEQ5 155 aaPredicted RBP15.18■□□□□ 0.02
PTCD1-202ENST00000419981 PNPT1Q8TCS8 783 aaKnown RBP15.18■□□□□ 0.02
PTCD1-202ENST00000419981 PAIP2Q9BPZ3 127 aaKnown RBP15.18■□□□□ 0.02
PTCD1-202ENST00000419981 INPP5KQ9BT40 448 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 MTHFD2LQ9H903 347 aaPredicted RBP15.18■□□□□ 0.02
PTCD1-202ENST00000419981 SLC7A10Q9NS82 523 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 AMDHD2Q9Y303 409 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 MALRD1Q5VYJ5 2156 aa15.18■□□□□ 0.02
PTCD1-202ENST00000419981 IGHV4-30-2A0A087WSY4 118 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 ZC3H12DA2A288 527 aaKnown RBP15.17■□□□□ 0.02
PTCD1-202ENST00000419981 CFAP73A6NFT4 308 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 SDHDO14521 159 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 DBIP07108 87 aaKnown RBP15.17■□□□□ 0.02
PTCD1-202ENST00000419981 IL12AP29459 219 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 DSCR9P59020 149 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 TGFBR3Q03167 851 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 SLC17A1Q14916 467 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 RAB35Q15286 201 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 COX20Q5RI15 118 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 ZNF544Q6NX49 715 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 PAQR6Q6TCH4 344 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 SPATA19Q7Z5L4 167 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 LSRQ86X29 649 aaPredicted RBP15.17■□□□□ 0.02
PTCD1-202ENST00000419981 ZNF440Q8IYI8 595 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 WDR31Q8NA23 367 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 SPATA3Q8NHX4 192 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 ZBTB18Q99592 522 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 C1QTNF6Q9BXI9 259 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 SLC17A5Q9NRA2 495 aa15.17■□□□□ 0.02
PTCD1-202ENST00000419981 FAM234BA2RU67 622 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 KRT75O95678 551 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 GSNP06396 782 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 GPIP06744 558 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 MPP2Q14168 576 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 CEP85LQ5SZL2 805 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 OTUD3Q5T2D3 398 aaPredicted RBP15.16■□□□□ 0.02
PTCD1-202ENST00000419981 TSPO2Q5TGU0 170 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 HMBOX1Q6NT76 420 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 HIPK1Q86Z02 1210 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 PEX5LQ8IYB4 626 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 OR10H5Q8NGA6 315 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 TMEM45BQ96B21 275 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 ADAM19Q9H013 955 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 FKRPQ9H9S5 495 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 P2RX2Q9UBL9 471 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 GPR45Q9Y5Y3 372 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 ATP23Q9Y6H3 246 aa15.16■□□□□ 0.02
PTCD1-202ENST00000419981 FBN1P35555 2871 aaKnown RBP15.15■□□□□ 0.02
PTCD1-202ENST00000419981 A8MV72 311 aaPredicted RBP15.15■□□□□ 0.02
PTCD1-202ENST00000419981 H7C417 338 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 CXCR1P25024 350 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 MPGP29372 298 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 SLC25A3Q00325 362 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 CEACAM7Q14002 265 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 OR7A5Q15622 319 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 GSTA3Q16772 222 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 TNFAIP8L3Q5GJ75 292 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 C1QTNF12Q5T7M4 302 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 HHATQ5VTY9 493 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 PODNL1Q6PEZ8 512 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 KLHL24Q6TFL4 600 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 ANKRD42Q8N9B4 389 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 GLB1L3Q8NCI6 653 aaPredicted RBP15.15■□□□□ 0.02
PTCD1-202ENST00000419981 HTRA1Q92743 480 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 SF3B5Q9BWJ5 86 aaKnown RBP15.15■□□□□ 0.02
PTCD1-202ENST00000419981 CALML5Q9NZT1 146 aa15.15■□□□□ 0.02
PTCD1-202ENST00000419981 ANK3Q12955 4377 aaKnown RBP15.15■□□□□ 0.02
PTCD1-202ENST00000419981 A0A096LNT2 108 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 CDHR4A6H8M9 788 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 LIPT2A6NK58 231 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 TRPC5OSA6NMA1 111 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 RFXANKO14593 260 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 HDAC3O15379 428 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 GPRIN2O60269 458 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 AKR7A3O95154 331 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 WNT11O96014 354 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 IFNA2P01563 188 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 GKN3PP0CG01 181 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 BMP4P12644 408 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 EPHA3P29320 983 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 PRPS1P60891 318 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 CHRFAM7AQ494W8 412 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 LIN52Q52LA3 116 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 ZNF836Q6ZNA1 936 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 AAED1Q7RTV5 226 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 ABHD12BQ7Z5M8 362 aaPredicted RBP15.14■□□□□ 0.01
PTCD1-202ENST00000419981 GPAT4Q86UL3 456 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 VRK2Q86Y07 508 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 ZNF525Q8N782 197 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 TMEM99Q8N816 258 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 POMGNT2Q8NAT1 580 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 OR9K2Q8NGE7 335 aa15.14■□□□□ 0.01
PTCD1-202ENST00000419981 OR52P1PQ8NH57 321 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms