RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 MAPK11Q15759 364 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 GSTA3Q16772 222 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 MRPL2Q5T653 305 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 PEX5LQ8IYB4 626 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 ZNF440Q8IYI8 595 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 KBTBD8Q8NFY9 601 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 PNPT1Q8TCS8 783 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 LRRC8CQ8TDW0 803 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 GTPBP3Q969Y2 492 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 ZNF317Q96PQ6 595 aaPredicted RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 EBF4Q9BQW3 602 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 NAA11Q9BSU3 229 aaPredicted RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 ADAM19Q9H013 955 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 SLC6A13Q9NSD5 602 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 ASB6Q9NWX5 421 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 CISD1Q9NZ45 108 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 CALML5Q9NZT1 146 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 ZIM2Q9NZV7 527 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 MAGED1Q9Y5V3 778 aaPredicted RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 USH1CQ9Y6N9 552 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 SHISA9B4DS77 424 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 UBDO15205 165 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 RAMP1O60894 148 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 RAD51DO75771 328 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 ANP32DO95626 131 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 CD8AP01732 235 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 ZCCHC18P0CG32 403 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 ETFAP13804 333 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 UQCRBP14927 111 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 CXCR1P25024 350 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 IDUAP35475 653 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 CDKN1AP38936 164 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 CRATP43155 626 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 IDH3AP50213 366 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 MVDP53602 400 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 GYS2P54840 703 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 FAPQ12884 760 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 TNK1Q13470 666 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 ETFDHQ16134 617 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 CLEC12BQ2HXU8 276 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 PGGHGQ32M88 737 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 LIN52Q52LA3 116 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 MSANTD1Q6ZTZ1 278 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 VRK2Q86Y07 508 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 OR52N5Q8NH56 324 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 OR52P1PQ8NH57 321 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 ITCHQ96J02 903 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 RADILQ96JH8 1075 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 MUS81Q96NY9 551 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 TRAF4Q9BUZ4 470 aaPredicted RBP8.31□□□□□ -1.08
NUP50-205ENST00000419387 GRIP2Q9C0E4 1043 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 RMND5AQ9H871 391 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 TPT1P8Q9HAU6 139 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 SDR39U1Q9NRG7 319 aaPredicted RBP8.31□□□□□ -1.08
NUP50-205ENST00000419387 RLIMQ9NVW2 624 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 PARPBPQ9NWS1 579 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 THUMPD1Q9NXG2 353 aaKnown RBP8.31□□□□□ -1.08
NUP50-205ENST00000419387 NPAP1Q9NZP6 1156 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 GMPR2Q9P2T1 348 aaKnown RBP8.31□□□□□ -1.08
NUP50-205ENST00000419387 P2RX2Q9UBL9 471 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 MALT1Q9UDY8 824 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 MGAT4BQ9UQ53 548 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 FLVCR1Q9Y5Y0 555 aa8.31□□□□□ -1.08
NUP50-205ENST00000419387 A0A0G2JPF8 293 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 ZC3H12DA2A288 527 aaKnown RBP8.3□□□□□ -1.08
NUP50-205ENST00000419387 CDHR4A6H8M9 788 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 HNRNPCL2B2RXH8 293 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 HNRNPCL3B7ZW38 293 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 PDLIM1O00151 329 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 ABCD4O14678 606 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 HNRNPCL1O60812 293 aaKnown RBP8.3□□□□□ -1.08
NUP50-205ENST00000419387 TGDSO95455 350 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 BCHEP06276 602 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 THBS1P07996 1170 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 ITGA5P08648 1049 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 TFPTP0C1Z6 253 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 GKN3PP0CG01 181 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 HNRNPCL4P0DMR1 293 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 PTAFRP25105 342 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 ACAA2P42765 397 aaKnown RBP8.3□□□□□ -1.08
NUP50-205ENST00000419387 SMCPP49901 116 aaPredicted RBP8.3□□□□□ -1.08
NUP50-205ENST00000419387 POLR2JP52435 117 aaKnown RBP8.3□□□□□ -1.08
NUP50-205ENST00000419387 CRISP3P54108 245 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 CDH11P55287 796 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 FOXG1P55316 489 aaPredicted RBP8.3□□□□□ -1.08
NUP50-205ENST00000419387 DSTNP60981 165 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 CEACAM7Q14002 265 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 SLC17A1Q14916 467 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 GABRA6Q16445 453 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 ZSWIM7Q19AV6 140 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 WBP2NLQ6ICG8 309 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 OR7E24Q6IFN5 339 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 PAQR6Q6TCH4 344 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 KLHL17Q6TDP4 642 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 TMEM108Q6UXF1 575 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 CASP12Q6UXS9 341 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 ZNF836Q6ZNA1 936 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 DTX2Q86UW9 622 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 OR52E4Q8NGH9 312 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 SLC38A5Q8WUX1 472 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms