RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 OR5M3Q8NGP4 307 aa7.67□□□□□ -1.18
USP54-203ENST00000418501 OR2I1PQ8NGU4 316 aa7.67□□□□□ -1.18
USP54-203ENST00000418501 PFN4Q8NHR9 129 aa7.67□□□□□ -1.18
USP54-203ENST00000418501 THAP3Q8WTV1 239 aaPredicted RBP7.67□□□□□ -1.18
USP54-203ENST00000418501 PRSS27Q9BQR3 290 aa7.67□□□□□ -1.18
USP54-203ENST00000418501 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
USP54-203ENST00000418501 CCDC59Q9P031 241 aaKnown RBP7.67□□□□□ -1.18
USP54-203ENST00000418501 CHRNA9Q9UGM1 479 aa7.67□□□□□ -1.18
USP54-203ENST00000418501 ZNF223Q9UK11 482 aaPredicted RBP7.67□□□□□ -1.18
USP54-203ENST00000418501 U3KQA8 63 aa7.67□□□□□ -1.18
USP54-203ENST00000418501 CDC14CA4D256 554 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 ZNF726A6NNF4 738 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 TGFBR3LH3BV60 316 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 PDCD5O14737 125 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 EIF1BO60739 113 aaKnown RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 ARL6IP5O75915 188 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 FBXO45P0C2W1 286 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 ZNF28P17035 718 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 AHCYP23526 432 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 MAPK3P27361 379 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 INPP1P49441 399 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 SLC35A1P78382 337 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 ZNF117Q03924 483 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 SELENBP1Q13228 472 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 TRIP6Q15654 476 aaKnown RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 SGCBQ16585 318 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 SLC35F1Q5T1Q4 408 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 KCTD18Q6PI47 426 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 CLEC1AQ8NC01 280 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 APH1BQ8WW43 257 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 LIPHQ8WWY8 451 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 PMEPA1Q969W9 287 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 TMIGD2Q96BF3 282 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 NXPE2Q96DL1 559 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 SPSB2Q99619 263 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 CHCHD6Q9BRQ6 235 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 DSN1Q9H410 356 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 HAO2Q9NYQ3 351 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 CLDN25C9JDP6 229 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 STMND1H3BQB6 276 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 HRKO00198 91 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 GABRB1P18505 474 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 SLC25A1P53007 311 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 OC90Q02509 493 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 PIGFQ07326 219 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 ZNF74Q16587 644 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 C3orf33Q6P1S2 294 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 OR52I1Q8NGK6 324 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 MFSD8Q8NHS3 518 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 ASB17Q8WXJ9 295 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 PHYHIPQ92561 330 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 PRR14Q9BWN1 585 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 COMMD4Q9H0A8 199 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 B3GAT2Q9NPZ5 323 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 EXOGQ9Y2C4 368 aaKnown RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 WIF1Q9Y5W5 379 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 NUP214P35658 2090 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 TRAV27A0A087WT01 109 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 LNP1A1A4G5 178 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 KLF4O43474 513 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 EPPINO95925 133 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 GALP22466 123 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 EPHA2P29317 976 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 TOMM20Q15388 145 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 GLYR1Q49A26 553 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 ZNF441Q8N8Z8 693 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 ATP6V1C2Q8NEY4 427 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 OR1J4Q8NGS1 313 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 PIGQQ9BRB3 760 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 JAM3Q9BX67 310 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 RBM38Q9H0Z9 239 aaKnown RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 ALKBH4Q9NXW9 302 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 GALNT8Q9NY28 637 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 FLRT3Q9NZU0 649 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 RABL2AQ9UBK7 228 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 RABL2BQ9UNT1 228 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 DTX4Q9Y2E6 619 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 TDRD6O60522 2096 aaKnown RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 DOCK9Q9BZ29 2069 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 IGHV3-20A0A0C4DH32 117 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 C4orf47A7E2U8 309 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 LOC110117498-PIK3R3F6TDL0 507 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 SDHAP31040 664 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 TALDO1P37837 337 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 NIPAL3Q6P499 406 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 LEG1Q6P5S2 330 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 OR6K6Q8NGW6 343 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 YIPF6Q96EC8 236 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 KLHL15Q96M94 604 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 GPX7Q96SL4 187 aaPredicted RBP7.66□□□□□ -1.18
USP54-203ENST00000418501 NRSN2Q9GZP1 204 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 NEK6Q9HC98 313 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 ASB6Q9NWX5 421 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 KCNE5Q9UJ90 142 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 B3GALT5Q9Y2C3 310 aa7.66□□□□□ -1.18
USP54-203ENST00000418501 NTNG1Q9Y2I2 539 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms