RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RNF212Q495C1 297 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 LY6G6FQ5SQ64 297 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC6A19Q695T7 634 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM71Q6P5X7 295 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 MAMSTRQ6ZN01 415 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 SYNPRQ8TBG9 265 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 LRIG1Q96JA1 1093 aa7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF471Q9BX82 626 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 ZCCHC2Q9C0B9 1178 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-202ENST00000418170 TTLL8A6PVC2 850 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF879B4DU55 563 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 BHLHE40O14503 412 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 TSPAN6O43657 245 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 IGSF6O95976 241 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 THY1P04216 161 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 CDK2P24941 298 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC16A1P53985 500 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 ACTC1P68032 377 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 ACTA1P68133 377 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 MLC1Q15049 377 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 EIF2S3LQ2VIR3 472 aaKnown RBP7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 NDUFAF6Q330K2 333 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 LIN54Q6MZP7 749 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 SSX6Q7RTT6 188 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 GPR142Q7Z601 462 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 KRT77Q7Z794 578 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 OR4C16Q8NGL9 310 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM255BQ8WV15 326 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 HAVCR1Q96D42 359 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 ADAM2Q99965 735 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 OR52D1Q9H346 318 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 ZCCHC3Q9NUD5 404 aaKnown RBP7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 GHRLQ9UBU3 117 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC13A4Q9UKG4 626 aa7.4□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC5A10A0PJK1 596 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 OR6C76A6NM76 312 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 FGF16O43320 207 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 FGBP02675 491 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 IL9P15248 144 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 SRMP19623 302 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PAX6P26367 422 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PNLIPRP2P54317 469 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 FXYD6P3P58550 94 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 TAS2R20P59543 309 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 RPS15P62841 145 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PEA15Q15121 130 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 MORN1Q5T089 497 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 GLT8D1Q68CQ7 371 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 RAB12Q6IQ22 244 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 UBE2E3Q969T4 207 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF764Q96H86 408 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 VRK1Q99986 396 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 EGLN1Q9GZT9 426 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PRMT8Q9NR22 394 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PRG3Q9Y2Y8 225 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 LRIT2A6NDA9 550 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF729A6NN14 1252 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 RTCAO00442 366 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 SELLP14151 372 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 NFYBP25208 207 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 UNQ9370/PRO34162Q6UXP9 181 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 GDF7Q7Z4P5 450 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 BEST3Q8N1M1 668 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 LNX2Q8N448 690 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 CHST14Q8NCH0 376 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 OR52L1Q8NGH7 329 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 OR1J4Q8NGS1 313 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PHYHIPQ92561 330 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 MRI1Q9BV20 369 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 OR51V1Q9H2C8 321 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 APMAPQ9HDC9 416 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 CMC2Q9NRP2 79 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 METTL1Q9UBP6 276 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 NTNG1Q9Y2I2 539 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 RNF222A6NCQ9 220 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF840PA6NDX5 716 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 OR5H14A6NHG9 310 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 LRRC72A6NJI9 287 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 NUDT19A8MXV4 375 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 C1orf196B1AJZ1 125 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 RDH16O75452 317 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 C1orf105O95561 183 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 TBX6O95947 436 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 CLTBP09497 229 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 BSGP35613 385 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 OR1G1P47890 313 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 ARFIP1P53367 373 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 SRSF3P84103 164 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PCGF3Q3KNV8 242 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 C4orf46Q504U0 113 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 STPG1Q5TH74 334 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PRAMEF8Q5VWM4 474 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 PRAMEF7Q5VXH5 474 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 FCRLBQ6BAA4 426 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 NAA40Q86UY6 237 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 GLB1L2Q8IW92 636 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 LMNTD1Q8N9Z9 388 aa7.39□□□□□ -1.23
HMGXB4-202ENST00000418170 CD99L2Q8TCZ2 262 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms