RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 C1orf140Q5VVS0 124 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 SP5Q6BEB4 398 aaPredicted RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 FKBP9P1Q75LS8 142 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 CBLL1Q75N03 491 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 RBM45Q8IUH3 476 aaKnown RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 RELL2Q8NC24 303 aaPredicted RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 OR4D11Q8NGI4 311 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 C1orf21Q9H246 121 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 KLHL9Q9P2J3 617 aa20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 FOXD3Q9UJU5 478 aaPredicted RBP20.63■□□□□ 0.89
SMARCB1-205ENST00000417137 PCNX1Q96RV3 2341 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 A0A087WUJ7 227 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 TRAPPC13A5PLN9 417 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 CYTIPO60759 359 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 NCK1P16333 377 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 FPR1P21462 350 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 IFNA8P32881 189 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 CDH12P55289 794 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 SIRPAP78324 504 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 RASGEF1BQ0VAM2 473 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 TMEM201Q5SNT2 666 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 ADAMTS16Q8TE57 1224 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 ABHD3Q8WU67 409 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 STARD4Q96DR4 205 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 EPYCQ99645 322 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 GORASP2Q9H8Y8 452 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 MAGEL2Q9UJ55 1249 aa20.62■□□□□ 0.89
SMARCB1-205ENST00000417137 IGHV3-15A0A0B4J1V0 119 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 LIPT2A6NK58 231 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 MSTNO14793 375 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 SMAD9O15198 467 aaKnown RBP20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 CHP2O43745 196 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 OR2T1O43869 369 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 NPIPB7O75200 414 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 IMPDH2P12268 514 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 OR1E2P47887 323 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 CEACAM7Q14002 265 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 GUSBP1Q15486 140 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 DEF8Q6ZN54 512 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 RINLQ6ZS11 566 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 FAM156AQ8NDB6 213 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 OR6K3Q8NGY3 331 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 PIGXQ8TBF5 258 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 GEMIN6Q8WXD5 167 aaKnown RBP20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 DNAJA3Q96EY1 480 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 MPP4Q96JB8 637 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 JKAMPQ9P055 326 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 CLEC4AQ9UMR7 237 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 PROCRQ9UNN8 238 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 SAMD4AQ9UPU9 718 aaKnown RBP20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 TEX15Q9BXT5 2789 aa20.61■□□□□ 0.89
SMARCB1-205ENST00000417137 SMNDC1O75940 238 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 UBOX5O94941 541 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 YES1P07947 543 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 TNFRSF1BP20333 461 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 TAS2R41P59536 307 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 TFF3Q07654 80 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 PDK3Q15120 406 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 OR7A5Q15622 319 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 FXNQ16595 210 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 FBXL19-AS1Q494R0 122 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 IFI44LQ53G44 452 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 PAQR6Q6TCH4 344 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 BTLAQ7Z6A9 289 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 MFSD8Q8NHS3 518 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 TMEM43Q9BTV4 400 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 DCAF13Q9NV06 445 aaKnown RBP20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 TAS2R1Q9NYW7 299 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 KLHL13Q9P2N7 655 aa20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 PRPF19Q9UMS4 504 aaKnown RBP20.6■□□□□ 0.89
SMARCB1-205ENST00000417137 KIAA1549Q9HCM3 1950 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 TRAV36DV7A0A075B6V5 113 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 IFNW1P05000 195 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 CD8BP10966 210 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 GRNP28799 593 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 GTF2E2P29084 291 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 PEX19P40855 299 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 H3F3AP84243 136 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 EGR4Q05215 589 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 VWA1Q6PCB0 445 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 VTCN1Q7Z7D3 282 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 TUSC5Q8IXB3 177 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 RNASE6Q93091 150 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 SLC41A3Q96GZ6 507 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 BCO1Q9HAY6 547 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 PLSCR4Q9NRQ2 329 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 EMC3Q9P0I2 261 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 SLC7A7Q9UM01 511 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 SNX13Q9Y5W8 968 aa20.59■□□□□ 0.89
SMARCB1-205ENST00000417137 ZNF724A8MTY0 619 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 A8MXE2 369 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 GPR171O14626 319 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 OR5F1O95221 314 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 THRBP10828 461 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 AGTR1P30556 359 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 UQCRC1P31930 480 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 RPS5P46782 204 aaKnown RBP20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 MFSD13AQ14CX5 517 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 FAM69AQ5T7M9 428 aa20.58■□□□□ 0.89
SMARCB1-205ENST00000417137 TTC33Q6PID6 262 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms