RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 MEDAGQ5VYS4 303 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 C3orf33Q6P1S2 294 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 GTPBP8Q8N3Z3 284 aaPredicted RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 TMEM178AQ8NBL3 297 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR13C2Q8NGS9 318 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 FBLIM1Q8WUP2 373 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 TM9SF4Q92544 642 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 TAAR8Q969N4 342 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF524Q96C55 264 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 KTI12Q96EK9 354 aaPredicted RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 SIGLEC12Q96PQ1 595 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 IFT27Q9BW83 186 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 POLDIP3Q9BY77 421 aaKnown RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF696Q9H7X3 374 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 RASSF1Q9NS23 344 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 DKK4Q9UBT3 224 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC6A5Q9Y345 797 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 AHCTF1Q8WYP5 2266 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 TRAV27A0A087WT01 109 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 SH3D21A4FU49 640 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 GJE1A6NN92 205 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 BLOC1S5-TXNDC5H3BN57 136 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 LINC01387J3KSC0 135 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR6A2O95222 327 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 BGLAPP02818 100 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF17P17021 662 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 EEF1B2P24534 225 aaKnown RBP12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 ELK4P28324 431 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 NOS3P29474 1203 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 IDUAP35475 653 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 RPL4P36578 427 aaKnown RBP12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 PCYT1AP49585 367 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 TMEM44Q2T9K0 475 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 PGGHGQ32M88 737 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 CLEC12AQ5QGZ9 265 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 ACSM5Q6NUN0 579 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 DPY19L2P2Q6ZN68 376 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 LRRC69Q6ZNQ3 347 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC46A3Q7Z3Q1 461 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 NANOGNBQ7Z5D8 188 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF227Q86WZ6 799 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 TCEANCQ8N8B7 351 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 FAM98AQ8NCA5 519 aaKnown RBP12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 ATP6V1C2Q8NEY4 427 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 BPIFB6Q8NFQ5 453 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR2M7Q8NG81 312 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 MFSD8Q8NHS3 518 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 POC1BQ8TC44 478 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC25A36Q96CQ1 311 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 PLA2G12AQ9BZM1 189 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 UBQLN3Q9H347 655 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 TUBA8Q9NY65 449 aaPredicted RBP12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 H2AFY2Q9P0M6 372 aaPredicted RBP12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 CORINQ9Y5Q5 1042 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 KCNMB2Q9Y691 235 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 GVINP1Q7Z2Y8 2422 aa12.9□□□□□ -0.34
HMGA1P1-201ENST00000415560 A0A087WXM4 84 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 TLX2O43763 284 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 IDH3BO43837 385 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 NME2P1O60361 137 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 FAM20BO75063 409 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 NPIPB7O75200 414 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 TRAPPC6AO75865 159 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 IFNGP01579 166 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 ASAH2BP0C7U1 165 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 NME2P22392 152 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 GDF1P27539 372 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 GPR85P60893 370 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 PLGLB1Q02325 96 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 OCLNQ16625 522 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 CTU2Q2VPK5 515 aaKnown RBP12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 SLC25A30Q5SVS4 291 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 RAET1LQ5VY80 246 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 TMEM154Q6P9G4 183 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 SULF2Q8IWU5 870 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 LNX2Q8N448 690 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 FAM26EQ8N5C1 309 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 IQCF1Q8N6M8 205 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 MDS2Q8NDY4 140 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 FDCSPQ8NFU4 85 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 TSPAN14Q8NG11 270 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 OR8D4Q8NGM9 314 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 OR5J2Q8NH18 312 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 OR14L1PQ8NHC6 308 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 CNIH3Q8TBE1 160 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 IPCEF1Q8WWN9 437 aaPredicted RBP12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 ZNF566Q969W8 418 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 MCCC2Q9HCC0 563 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 PLCXD1Q9NUJ7 323 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 ZNF226Q9NYT6 803 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 HIF3AQ9Y2N7 669 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 HDGFL3Q9Y3E1 203 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 PCDHGB5Q9Y5G0 923 aa12.89□□□□□ -0.35
HMGA1P1-201ENST00000415560 B4DXG7 233 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 LRRN3E7EW58 273 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 SLC1A7O00341 560 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 ZIC3O60481 467 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 CEACAM4O75871 244 aa12.88□□□□□ -0.35
HMGA1P1-201ENST00000415560 EIF2S3P41091 472 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms