RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TYW3Q6IPR3 259 aaKnown RBP9.08□□□□□ -0.96
DDB1-202ENST00000414411 FIGNL1Q6PIW4 674 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 IGFL2Q6UWQ7 119 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 FRRS1Q6ZNA5 592 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 C16orf62Q7Z3J2 963 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 SNX29P2Q8IUI4 249 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 PRR22Q8IZ63 422 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 IQCF1Q8N6M8 205 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 TCEANCQ8N8B7 351 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 RNF217Q8TC41 542 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 SLC22A8Q8TCC7 542 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 OPALINQ96PE5 141 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 GPA33Q99795 319 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 ARHGDIGQ99819 225 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 G6PC3Q9BUM1 346 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 PRR14Q9BWN1 585 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 CDADC1Q9BWV3 514 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 POLDIP3Q9BY77 421 aaKnown RBP9.08□□□□□ -0.96
DDB1-202ENST00000414411 RNF167Q9H6Y7 350 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 TRIM45Q9H8W5 580 aaPredicted RBP9.08□□□□□ -0.96
DDB1-202ENST00000414411 CTPS2Q9NRF8 586 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 POLE3Q9NRF9 147 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 TEKT2Q9UIF3 430 aa9.08□□□□□ -0.96
DDB1-202ENST00000414411 MRTO4Q9UKD2 239 aaKnown RBP9.08□□□□□ -0.96
DDB1-202ENST00000414411 RPL36Q9Y3U8 105 aaKnown RBP9.08□□□□□ -0.96
DDB1-202ENST00000414411 TLN1Q9Y490 2541 aaKnown RBP9.08□□□□□ -0.96
DDB1-202ENST00000414411 PRKYO43930 277 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 REM1O75628 298 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 F12P00748 615 aaPredicted RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 SCG5P05408 212 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 GSTM3P21266 225 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 CD40LGP29965 261 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 LCN1P31025 176 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 BCAP31P51572 246 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 PPP5CP53041 499 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 PLCXD2Q0VAA5 305 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 SSX1Q16384 188 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 NTRK2Q16620 822 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 TBR1Q16650 682 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 SLC25A30Q5SVS4 291 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 RNLSQ5VYX0 342 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 OPN5Q6U736 354 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 ZNF227Q86WZ6 799 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 VRK2Q86Y07 508 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 BEST3Q8N1M1 668 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 FAM26EQ8N5C1 309 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 MINDY2Q8NBR6 621 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 OR4C3Q8NH37 302 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 RNF138Q8WVD3 245 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 NR4A3Q92570 626 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 HGDQ93099 445 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 EFHD2Q96C19 240 aaPredicted RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 SPACA9Q96E40 222 aaPredicted RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 TMEM80Q96HE8 168 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 ADOQ96SZ5 270 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 TSSK6Q9BXA6 273 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 MTHFD2LQ9H903 347 aaPredicted RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 TVP23BQ9NYZ1 205 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 KCNE5Q9UJ90 142 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 MKLN1Q9UL63 735 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 CHST2Q9Y4C5 530 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 A0A087WUU8 490 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 AGAP5A6NIR3 686 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 ITGB2P05107 769 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 ENDOUP21128 410 aaKnown RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 PRKAR1BP31321 381 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 GIPRP48546 466 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 PSMD4P55036 377 aaKnown RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 FBXW4P57775 412 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 TAS2R41P59536 307 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 CXADRP78310 365 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 CDK5Q00535 292 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 MFAP5Q13361 173 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 GINS1Q14691 196 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 SWI5Q1ZZU3 235 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 SYT14P1Q58G82 188 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 ABHD17BQ5VST6 288 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 TUBA3EQ6PEY2 450 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 NUP54Q7Z3B4 507 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 BCDIN3DQ7Z5W3 292 aaKnown RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 KIF18BQ86Y91 864 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 DND1Q8IYX4 353 aaKnown RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 ASB15Q8WXK1 588 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 ITFG2Q969R8 447 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 NTNG2Q96CW9 530 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 SMAD5Q99717 465 aaKnown RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 MND1Q9BWT6 205 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 PLA2G12AQ9BZM1 189 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 C6orf62Q9GZU0 229 aaPredicted RBP9.07□□□□□ -0.96
DDB1-202ENST00000414411 RNF32Q9H0A6 362 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 RACGAP1Q9H0H5 632 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 ANKRD19PQ9H560 264 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 HHATLQ9HCP6 504 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 SH2D2AQ9NP31 389 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 CLEC2DQ9UHP7 191 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 SLC13A4Q9UKG4 626 aa9.07□□□□□ -0.96
DDB1-202ENST00000414411 WDR45Q9Y484 360 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms