RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 UBE2J2Q8N2K1 259 aa23.25■■□□□ 1.31
VEGFA-207ENST00000413642 APH1AQ96BI3 265 aa23.25■■□□□ 1.31
VEGFA-207ENST00000413642 NAA11Q9BSU3 229 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-207ENST00000413642 TMEM38AQ9H6F2 299 aa23.25■■□□□ 1.31
VEGFA-207ENST00000413642 FGFR1OP2Q9NVK5 253 aa23.25■■□□□ 1.31
VEGFA-207ENST00000413642 A8MVM7 634 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 ANGPT2O15123 496 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 EIF1BO60739 113 aaKnown RBP23.24■■□□□ 1.31
VEGFA-207ENST00000413642 HTR2AP28223 471 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 PRKAR1BP31321 381 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 MTPNP58546 118 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 ADAM8P78325 824 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 CAPRIN1Q14444 709 aaKnown RBP23.24■■□□□ 1.31
VEGFA-207ENST00000413642 OTUD3Q5T2D3 398 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-207ENST00000413642 FBXW9Q5XUX1 488 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 SEZ6L2Q6UXD5 910 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 PTOV1Q86YD1 416 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 DPP10Q8N608 796 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 ANKRD27Q96NW4 1050 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 CGREF1Q99674 301 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 WFDC6Q9BQY6 131 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 SIKE1Q9BRV8 207 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 TMUB1Q9BVT8 246 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 FLVCR1Q9Y5Y0 555 aa23.24■■□□□ 1.31
VEGFA-207ENST00000413642 CELSR1Q9NYQ6 3014 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 TMEM229AB2RXF0 380 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 GPR171O14626 319 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 GPIP06744 558 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 FOXD4Q12950 439 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-207ENST00000413642 NFYCQ13952 458 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 SLC17A1Q14916 467 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 STK11Q15831 433 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 C1orf140Q5VVS0 124 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 DHRS4L2Q6PKH6 230 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 PAQR6Q6TCH4 344 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 ZNF433Q8N7K0 673 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-207ENST00000413642 WFDC11Q8NEX6 87 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 HSD17B8Q92506 261 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 TMEM204Q9BSN7 226 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 BEX4Q9NWD9 120 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-207ENST00000413642 ADPRHL2Q9NX46 363 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 CORO2BQ9UQ03 480 aa23.23■■□□□ 1.31
VEGFA-207ENST00000413642 FBP2O00757 339 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 NPIPB7O75200 414 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 MRPL33O75394 65 aaKnown RBP23.22■■□□□ 1.31
VEGFA-207ENST00000413642 CD99P14209 185 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 COX5AP20674 150 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 SLC6A2P23975 617 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 GUCY1A3Q02108 690 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 METTL21CQ5VZV1 264 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 CASP12Q6UXS9 341 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 KRT73Q86Y46 540 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 KRTAP1-3Q8IUG1 177 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 ZIC4Q8N9L1 334 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 OR52E4Q8NGH9 312 aa23.22■■□□□ 1.31
VEGFA-207ENST00000413642 FREM1Q5H8C1 2179 aa23.21■■□□□ 1.31
VEGFA-207ENST00000413642 NR1H2P55055 460 aa23.21■■□□□ 1.31
VEGFA-207ENST00000413642 DMTNQ08495 405 aa23.21■■□□□ 1.31
VEGFA-207ENST00000413642 FAPQ12884 760 aa23.21■■□□□ 1.31
VEGFA-207ENST00000413642 HIPK4Q8NE63 616 aa23.21■■□□□ 1.31
VEGFA-207ENST00000413642 SLC35B4Q969S0 331 aa23.21■■□□□ 1.31
VEGFA-207ENST00000413642 ZNF385AQ96PM9 386 aaKnown RBP23.21■■□□□ 1.31
VEGFA-207ENST00000413642 TAPBPLQ9BX59 468 aa23.21■■□□□ 1.31
VEGFA-207ENST00000413642 PRDM4Q9UKN5 801 aa23.21■■□□□ 1.31
VEGFA-207ENST00000413642 A0A1B0GWA3 101 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 AQP7P3A6NL99 342 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 RAD51DO75771 328 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 CNOT4O95628 575 aaKnown RBP23.2■■□□□ 1.3
VEGFA-207ENST00000413642 VIMP08670 466 aaKnown RBP23.2■■□□□ 1.3
VEGFA-207ENST00000413642 P2RY4P51582 365 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 ARFIP2P53365 341 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 EGR4Q05215 589 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 NCMAPQ5T1S8 102 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 P3H2Q8IVL5 708 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 LILRB1Q8NHL6 650 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-207ENST00000413642 TSPEARQ8WU66 669 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 NEUROG1Q92886 237 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 CCL19Q99731 98 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 PTDSS2Q9BVG9 487 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 SPATA5L1Q9BVQ7 753 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 RPS6KB2Q9UBS0 482 aa23.2■■□□□ 1.3
VEGFA-207ENST00000413642 DPRXA6NFQ7 191 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 CLOCKO15516 846 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 MFN2O95140 757 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 OPN1SWP03999 348 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 TROVE2P10155 538 aaKnown RBP eCLIP23.19■■□□□ 1.33e-17■■■□□ 18.6
VEGFA-207ENST00000413642 GGT1P19440 569 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 HOXC12P31275 282 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 NKX6-1P78426 367 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-207ENST00000413642 CYP51A1Q16850 503 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 TSPO2Q5TGU0 170 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 C9orf135Q5VTT2 229 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 GPAT4Q86UL3 456 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 SMYD1Q8NB12 490 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 OR9K2Q8NGE7 335 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 AKAP1Q92667 903 aaKnown RBP eCLIP23.19■■□□□ 1.3
VEGFA-207ENST00000413642 SLC25A36Q96CQ1 311 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 KTI12Q96EK9 354 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-207ENST00000413642 ZNF607Q96SK3 696 aa23.19■■□□□ 1.3
VEGFA-207ENST00000413642 SLC7A10Q9NS82 523 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms