RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 IL11P20809 199 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 NME2P22392 152 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 CRHBPP24387 322 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 DPP4P27487 766 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 ADH6P28332 368 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SRD5A2P31213 254 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 FMO3P31513 532 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 UQCRC1P31930 480 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 GRK5P34947 590 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 EIF1P41567 113 aaKnown RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 RPS5P46782 204 aaKnown RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 GIPRP48546 466 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 PCYT1AP49585 367 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 MAP2K6P52564 334 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 DSCR4P56555 118 aaPredicted RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 GABARAPL2P60520 117 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SNRPGP62308 76 aaKnown RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 LTBQ06643 244 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SELENBP1Q13228 472 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 APOFQ13790 326 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SMN1Q16637 294 aaKnown RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 TMEM44Q2T9K0 475 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 DEFB109BQ30KR1 87 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 ZBED5Q49AG3 693 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 GXYLT1Q4G148 440 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SYT14P1Q58G82 188 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 RBM48Q5RL73 367 aaKnown RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 C6orf141Q5SZD1 244 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 FAM69AQ5T7M9 428 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 C1orf140Q5VVS0 124 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 ACSM5Q6NUN0 579 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 C3orf33Q6P1S2 294 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 CASP12Q6UXS9 341 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 THSD4Q6ZMP0 1018 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 NANOGNBQ7Z5D8 188 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 GTPBP8Q8N3Z3 284 aaPredicted RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 C10orf53Q8N6V4 93 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 LRRC17Q8N6Y2 441 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 FDCSPQ8NFU4 85 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 OR6S1Q8NH40 331 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 OR51A7Q8NH64 312 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 RHOXF1Q8NHV9 184 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 UBE2FQ969M7 185 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 TAAR8Q969N4 342 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 DDIT4LQ96D03 193 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SAMD8Q96LT4 415 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 GNRHR2Q96P88 292 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SLC38A2Q96QD8 506 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 GPX7Q96SL4 187 aaPredicted RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 FAM173AQ9BQD7 235 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 POLDIP3Q9BY77 421 aaKnown RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 HES7Q9BYE0 225 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 YTHDF1Q9BYJ9 559 aaKnown RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 OR11A1Q9GZK7 315 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 ADNPQ9H2P0 1102 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 UBQLN3Q9H347 655 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 NANSQ9NR45 359 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 TUBA8Q9NY65 449 aaPredicted RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 TVP23BQ9NYZ1 205 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 PLA2G3Q9NZ20 509 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 AASSQ9UDR5 926 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SCOCQ9UIL1 159 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 ZNF229Q9UJW7 825 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 BLOC1S6Q9UL45 172 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 HIF3AQ9Y2N7 669 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SPIN1Q9Y657 262 aaPredicted RBP6.01□□□□□ -1.45
VPS41-204ENST00000413141 KCNMB2Q9Y691 235 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 DOCK10Q96BY6 2186 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 FTCDNL1E5RQL4 147 aa6□□□□□ -1.45
VPS41-204ENST00000413141 H3BML4 177 aa6□□□□□ -1.45
VPS41-204ENST00000413141 SURF4O15260 269 aa6□□□□□ -1.45
VPS41-204ENST00000413141 OR2T1O43869 369 aa6□□□□□ -1.45
VPS41-204ENST00000413141 XPNPEP2O43895 674 aa6□□□□□ -1.45
VPS41-204ENST00000413141 EFNA2O43921 213 aa6□□□□□ -1.45
VPS41-204ENST00000413141 FZD7O75084 574 aa6□□□□□ -1.45
VPS41-204ENST00000413141 PPP1R3DO95685 299 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TSPAN19P0C672 248 aa6□□□□□ -1.45
VPS41-204ENST00000413141 CCDC159P0C7I6 412 aa6□□□□□ -1.45
VPS41-204ENST00000413141 RFPL3SP0C7P2 107 aa6□□□□□ -1.45
VPS41-204ENST00000413141 PEPDP12955 493 aa6□□□□□ -1.45
VPS41-204ENST00000413141 BMP7P18075 431 aa6□□□□□ -1.45
VPS41-204ENST00000413141 HK1P19367 917 aa6□□□□□ -1.45
VPS41-204ENST00000413141 CNR1P21554 472 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TCEA1P23193 301 aaKnown RBP6□□□□□ -1.45
VPS41-204ENST00000413141 SLC6A6P31641 620 aa6□□□□□ -1.45
VPS41-204ENST00000413141 IDUAP35475 653 aa6□□□□□ -1.45
VPS41-204ENST00000413141 CCL11P51671 97 aa6□□□□□ -1.45
VPS41-204ENST00000413141 MLLT10P55197 1068 aa6□□□□□ -1.45
VPS41-204ENST00000413141 PRPS1P60891 318 aa6□□□□□ -1.45
VPS41-204ENST00000413141 CXCR4P61073 352 aa6□□□□□ -1.45
VPS41-204ENST00000413141 ARG2P78540 354 aa6□□□□□ -1.45
VPS41-204ENST00000413141 EFNB1P98172 346 aa6□□□□□ -1.45
VPS41-204ENST00000413141 FOXO1Q12778 655 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TOP3AQ13472 1001 aaPredicted RBP6□□□□□ -1.45
VPS41-204ENST00000413141 BLMHQ13867 455 aa6□□□□□ -1.45
VPS41-204ENST00000413141 SNAPC1Q16533 368 aa6□□□□□ -1.45
VPS41-204ENST00000413141 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6□□□□□ -1.45
VPS41-204ENST00000413141 ANKDD1AQ495B1 522 aa6□□□□□ -1.45
VPS41-204ENST00000413141 TMEM201Q5SNT2 666 aa6□□□□□ -1.45
VPS41-204ENST00000413141 C1QL3Q5VWW1 255 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms