RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 OR5H1A6NKK0 313 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 FAM220BPB1ANY3 271 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 GABRDO14764 452 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 GLP2RO95838 553 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 STAG3L2P0CL84 134 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CEACAM3P40198 252 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 SLC19A1P41440 591 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CRYBB2P43320 205 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 KHKP50053 298 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ERVFC1-1P60608 527 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 MAP2K5Q13163 448 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 RPE65Q16518 533 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ATXN7L2Q5T6C5 722 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 GFI1BQ5VTD9 330 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 NKAIN2Q5VXU1 208 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 SLC39A4Q6P5W5 647 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 UBE3DQ7Z6J8 389 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ZNF467Q7Z7K2 595 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 LYG2Q86SG7 212 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 LDB1Q86U70 411 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 CALHM3Q86XJ0 350 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 HS3ST5Q8IZT8 346 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 OR13D1Q8NGV5 346 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 TMEM163Q8TC26 289 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 HPSE2Q8WWQ2 592 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 DYNLL2Q96FJ2 89 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 DIRAS2Q96HU8 199 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 APOBEC3GQ9HC16 384 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 TNFRSF12AQ9NP84 129 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 NDUFB11Q9NX14 153 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 NTMQ9P121 344 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 STOX2Q9P2F5 926 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 SUSD2Q9UGT4 822 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 A4GNTQ9UNA3 340 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ICKQ9UPZ9 632 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 OR10H1Q9Y4A9 318 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 COL11A1P12107 1806 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 C17orf105B2RV13 164 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 TXNDC12O95881 172 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ACTL6AO96019 429 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 PDGFBP01127 241 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 CLEC3BP05452 202 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 NCK1P16333 377 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 LPOP22079 712 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 PDLIM4P50479 330 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 RAB10P61026 200 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CSNK1G2P78368 415 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ABHD18Q0P651 414 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 HERPUD1Q15011 391 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 SSX1Q16384 188 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 UGT8Q16880 541 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 SPIN4Q56A73 249 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 XKR7Q5GH72 579 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 NBPF12Q5TAG4 269 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 DCAF12L2Q5VW00 463 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 LINC01551Q86U37 167 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 GPC2Q8N158 579 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 OR4S1Q8NGB4 309 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 TOMM40LQ969M1 308 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 FICDQ9BVA6 458 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ASPNQ9BXN1 380 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ACTR3CQ9C0K3 210 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 CPVLQ9H3G5 476 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 POMKQ9H5K3 350 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 SLC2A9Q9NRM0 540 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CXXC1Q9P0U4 656 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 WRAP73Q9P2S5 460 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 SAMD4AQ9UPU9 718 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 KAT6AQ92794 2004 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 LOC105369274A0A096LPK9 316 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 PROB1E7EW31 1015 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 H0Y8G0 127 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 KLRC4-KLRK1H3BQV0 150 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 PLRG1O43660 514 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 NARSO43776 548 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 RPA2P15927 270 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 HMGB2P26583 209 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 GGT2P36268 569 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CLDN18P56856 261 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ITKQ08881 620 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 DOC2BQ14184 412 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 NDUFA9Q16795 377 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CCSMST1Q4G0I0 132 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 TM4SF20Q53R12 229 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 OCIAD2Q56VL3 154 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 OR4N4Q8N0Y3 316 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 BPIFB2Q8N4F0 458 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 TMEM161BQ8NDZ6 487 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ZNF583Q96ND8 569 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 TMEM74Q96NL1 305 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 SEPT5Q99719 369 aaPredicted RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 REPIN1Q9BWE0 567 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 ACTRT3Q9BYD9 372 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 TBL1XR1Q9BZK7 514 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 MAN2C1Q9NTJ4 1040 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 PADI1Q9ULC6 663 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 ADAM18Q9Y3Q7 739 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 CFAP20Q9Y6A4 193 aaKnown RBP4.83□□□□□ -1.64
HERC4-205ENST00000412272 COL4A4P53420 1690 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms