RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PEPDP12955 493 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 NOS3P29474 1203 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 CASRP41180 1078 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 FADS6Q8N9I5 356 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 OR8J1Q8NGP2 316 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 FRMD6Q96NE9 622 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 SIGLEC12Q96PQ1 595 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 UTP23Q9BRU9 249 aaKnown RBP11.27□□□□□ -0.6
CHMP3-204ENST00000409727 POLDIP3Q9BY77 421 aaKnown RBP11.27□□□□□ -0.6
CHMP3-204ENST00000409727 CHRNA9Q9UGM1 479 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 MPDZO75970 2070 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 TRAV36DV7A0A075B6V5 113 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 TRIM64A6NGJ6 449 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 FAM183AA6NL82 134 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 A8MVM7 634 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 MCIDASD6RGH6 385 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 BHLHE40O14503 412 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 SNPHO15079 494 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 SURF4O15260 269 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 SERPINI2O75830 405 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 NDUFB2O95178 105 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 TFAP2AP05549 437 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 HTR1AP08908 422 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 TFPIP10646 304 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 AQP2P41181 271 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 APOBEC1P41238 236 aaKnown RBP11.27□□□□□ -0.61
CHMP3-204ENST00000409727 CXCR4P61073 352 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 SNRPGP62308 76 aaKnown RBP11.27□□□□□ -0.61
CHMP3-204ENST00000409727 TUBA3CQ13748 450 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 NEDD8Q15843 81 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 C1orf140Q5VVS0 124 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 RPL13AP3Q6NVV1 102 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 TMEM81Q6P7N7 255 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 TUBA3EQ6PEY2 450 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF773Q6PK81 442 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 SATL1Q86VE3 508 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 MOSPD2Q8NHP6 518 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 POC1BQ8TC44 478 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 THAP4Q8WY91 577 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF566Q969W8 418 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 SCNM1Q9BWG6 230 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 PRRG3Q9BZD7 231 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 DEPPQ9NTK1 212 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 SEC14L4Q9UDX3 406 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 BOLA1Q9Y3E2 137 aa11.27□□□□□ -0.61
CHMP3-204ENST00000409727 MED13Q9UHV7 2174 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 SNX4O95219 450 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 HIST1H2ABP04908 130 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 DPP4P27487 766 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 SLC6A6P31641 620 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 CCL11P51671 97 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 RRADP55042 308 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 GABARAPL2P60520 117 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 SLC35A2P78381 396 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 FOXK2Q01167 660 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 OR1C1Q15619 314 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 SYT14P1Q58G82 188 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 TIGD3Q6B0B8 471 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 KCTD8Q6ZWB6 473 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 HIST3H2AQ7L7L0 130 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 NANOGNBQ7Z5D8 188 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 TMEM163Q8TC26 289 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 TRUB1Q8WWH5 349 aaKnown RBP11.26□□□□□ -0.61
CHMP3-204ENST00000409727 HIST1H2ACQ93077 130 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 ARL5BQ96KC2 179 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 MRGPRX4Q96LA9 322 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 ERMAPQ96PL5 475 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-204ENST00000409727 UBL7Q96S82 380 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-204ENST00000409727 COPS4Q9BT78 406 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 PTDSS2Q9BVG9 487 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 HES7Q9BYE0 225 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 TIMMDC1Q9NPL8 285 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 BATF3Q9NR55 127 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 KLHL1Q9NR64 748 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 DKKL1Q9UK85 242 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 ADAM18Q9Y3Q7 739 aa11.26□□□□□ -0.61
CHMP3-204ENST00000409727 KLK10O43240 276 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 EFNA2O43921 213 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 NEURL1O76050 574 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 AHSA1O95433 338 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 BGLAPP02818 100 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 HMGN1P05114 100 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 F13BP05160 661 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 ASAH2BP0C7U1 165 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 HK1P19367 917 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 ERVK-25P63136 954 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 MVKQ03426 396 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 AGAP7PQ5VUJ5 663 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 RAET1LQ5VY80 246 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 SLC6A19Q695T7 634 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 GPALPP1Q8IXQ4 340 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 GHDCQ8N2G8 530 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 LNX2Q8N448 690 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 GGHQ92820 318 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 Q96MT0 163 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF582Q96NG8 517 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-204ENST00000409727 AGAP4Q96P64 663 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 MED20Q9H944 212 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 IER3IP1Q9Y5U9 82 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 SNX5Q9Y5X3 404 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms