RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 LBHQ53QV2 105 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ENPP7Q6UWV6 458 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 FCRLAQ7L513 359 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SLC43A2Q8N370 569 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 UBE2E3Q969T4 207 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 RAB7BQ96AH8 199 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 C14orf79Q96F83 325 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 GGACTQ9BVM4 153 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 C1QTNF2Q9BXJ5 285 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CCDC86Q9H6F5 360 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 EXO5Q9H790 373 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ASH2LQ9UBL3 628 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ST6GALNAC2Q9UJ37 374 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 LRFN2Q9ULH4 789 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 DYRK1BQ9Y463 629 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 A0A0G2JLL6 359 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 LOC390937A0A1W2PQ73 354 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CDHR4A6H8M9 788 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 FAM86C2PA6NEL3 165 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 FAM183AA6NL82 134 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 AP4M1O00189 453 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SAP18O00422 153 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SLC31A2O15432 143 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 OGG1O15527 345 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 KLF4O43474 513 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 PIP5K1CO60331 668 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 KLHL18O94889 574 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CD2P06729 351 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CD63P08962 238 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 HOXC4P09017 264 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 RNF224P0DH78 156 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SRMP19623 302 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 LAP3P28838 519 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SDHAP31040 664 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 PYCR1P32322 319 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ACTR1BP42025 376 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CTSOP43234 321 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 HTR5AP47898 357 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 UBE2MP61081 183 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ACTA2P62736 377 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ACTG2P63267 376 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 PJVKQ0ZLH3 352 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 HSPB3Q12988 150 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 VGLL4Q14135 290 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SLBPQ14493 270 aaKnown RBP eCLIP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 C9orf152Q5JTZ5 239 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 PIP5KL1Q5T9C9 394 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 MBOAT2Q6ZWT7 520 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 PRRT2Q7Z6L0 340 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 INO80EQ8NBZ0 244 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 OR13C5Q8NGS8 318 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CXorf40AQ8TE69 158 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 PAQR8Q8TEZ7 354 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ZFPM2Q8WW38 1151 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 XAGE5Q8WWM1 108 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 NEIL2Q969S2 332 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 HIST1H2BAQ96A08 127 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 MIB2Q96AX9 1013 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 HSPA12BQ96MM6 686 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 DERL3Q96Q80 235 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ZCCHC2Q9C0B9 1178 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 TOLLIPQ9H0E2 274 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 WDR13Q9H1Z4 485 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 UBQLN3Q9H347 655 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CWH43Q9H720 699 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SEC61A2Q9H9S3 476 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 FBXL4Q9UKA2 621 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 A0A1B0GWJ7 208 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 A0A1W2PPK0 400 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 GXYLT2A0PJZ3 443 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 POM121BA6NF01 834 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 BLOC1S5-TXNDC5H3BN57 136 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 H7C417 338 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 M0QZ92 97 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 OR2T1O43869 369 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CTNSO60931 367 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SLCO2B1O94956 709 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SLC34A2O95436 690 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 EPPINO95925 133 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 F12P00748 615 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 MELTFP08582 738 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 AKAIN1P0CW23 69 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 APEHP13798 732 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CDK2P24941 298 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 GRK4P32298 578 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 RBM34P42696 430 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 OR12D2P58182 307 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 TAS2R20P59543 309 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SPCS3P61009 180 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 ZNF234Q14588 700 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 CDK5R1Q15078 307 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 IRF4Q15306 451 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 HMGN3Q15651 99 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 PRAMEF8Q5VWM4 474 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 PRAMEF7Q5VXH5 474 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 RPTNQ6XPR3 784 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 STEAP2Q8NFT2 490 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 OR4C16Q8NGL9 310 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 OR5M8Q8NGP6 311 aa5.39□□□□□ -1.55
R3HDM1-202ENST00000409478 SMPDL3BQ92485 455 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms