RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PGM3O95394 542 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 THBS1P07996 1170 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 HNRNPCL4P0DMR1 293 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 CXCR1P25024 350 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 MAP2K6P52564 334 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 AQP5P55064 265 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 LARS2Q15031 903 aaKnown RBP17■□□□□ 0.31
SMARCB1-204ENST00000407422 TIMM23BQ5SRD1 257 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 BLOC1S3Q6QNY0 202 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 SERPINA11Q86U17 422 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 MSRB3Q8IXL7 192 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 CXorf56Q9H5V9 222 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 THUMPD1Q9NXG2 353 aaKnown RBP17■□□□□ 0.31
SMARCB1-204ENST00000407422 CCDC167Q9P0B6 97 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 A0A096LPI6 279 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 OR5H1A6NKK0 313 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 SOD3P08294 240 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 PAX1P15863 534 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 FAPQ12884 760 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 CEACAM7Q14002 265 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 SLC17A1Q14916 467 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 WBP2NLQ6ICG8 309 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 PAQR6Q6TCH4 344 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 C10orf111Q8N326 155 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 OR52E4Q8NGH9 312 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 FBXW5Q969U6 566 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 MUCL1Q96DR8 90 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 COX4I2Q96KJ9 171 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 NAA11Q9BSU3 229 aaPredicted RBP16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 RSPO3Q9BXY4 272 aaPredicted RBP16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 HEATR1Q9H583 2144 aaKnown RBP16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 A4GALTQ9NPC4 353 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 SLC52A3Q9NQ40 469 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 ASB6Q9NWX5 421 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 MALT1Q9UDY8 824 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 ZNF232Q9UNY5 417 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 FLVCR1Q9Y5Y0 555 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 FN1P02751 2386 aaKnown RBP16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 TMEM247A6NEH6 219 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 LIPT2A6NK58 231 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 NR5A2O00482 541 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 FRS3O43559 492 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 AKR7A3O95154 331 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 DANCRP0C864 163 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 BMP2P12643 396 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 IDUAP35475 653 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 COPZ1P61923 177 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 HOXC5Q00444 222 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 OR7A5Q15622 319 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 ZNF672Q499Z4 452 aaPredicted RBP16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 ZNF311Q5JNZ3 666 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 PAGE3Q5JUK9 113 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 CLEC9AQ6UXN8 241 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 CASP12Q6UXS9 341 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 TMEM99Q8N816 258 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 OR52N5Q8NH56 324 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 SPDL1Q96EA4 605 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 CCDC28BQ9BUN5 200 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 SPATA9Q9BWV2 254 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 TRIM2Q9C040 744 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 BCL2L10Q9HD36 194 aa16.99■□□□□ 0.31
SMARCB1-204ENST00000407422 A0A1W2PR80 420 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 CIB4A0PJX0 185 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 CCT8L1PA6NM43 557 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 SMAD7O15105 426 aaKnown RBP16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 NCF2P19878 526 aaPredicted RBP16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 ATP5J2P56134 94 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 LTBQ06643 244 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 FADDQ13158 208 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 OTUD3Q5T2D3 398 aaPredicted RBP16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 LRIF1Q5T3J3 769 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 P2RY8Q86VZ1 359 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 GOLGA6L1Q8N7Z2 621 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 SMAP2Q8WU79 429 aaPredicted RBP16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 DYDC1Q8WWB3 177 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 TAS2R16Q9NYV7 291 aa16.98■□□□□ 0.31
SMARCB1-204ENST00000407422 ALPK2Q86TB3 2170 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 GPIP06744 558 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 ITGA5P08648 1049 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 RPS4XP62701 263 aaKnown RBP16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 ZSWIM7Q19AV6 140 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 C9orf135Q5VTT2 229 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 ZIC4Q8N9L1 334 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 C3orf49Q96BT1 292 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 BDH2Q9BUT1 245 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 RAD21L1Q9H4I0 556 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 SLC7A10Q9NS82 523 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 ADPRHL2Q9NX46 363 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 VAPAQ9P0L0 249 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 SLC9A8Q9Y2E8 581 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 IFT52Q9Y366 437 aa16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 MAGED1Q9Y5V3 778 aaPredicted RBP16.97■□□□□ 0.31
SMARCB1-204ENST00000407422 A8MVM7 634 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 SHISA9B4DS77 424 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 OVOL3O00110 214 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 PDLIM1O00151 329 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 ABCD4O14678 606 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 LY6G6DO95868 133 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 GABRA6Q16445 453 aa16.96■□□□□ 0.31
SMARCB1-204ENST00000407422 PGGHGQ32M88 737 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms