RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 G3V3Q6 166 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 UBE2CO00762 179 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 MAGEB4O15481 346 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 PRH1P02810 166 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 RPA2P15927 270 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 RGRP47804 291 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 RAB4BP61018 213 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 ZNF763Q0D2J5 394 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 TAF1CQ15572 869 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 MAPK14Q16539 360 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 MAMDC2Q7Z304 686 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 C6orf120Q7Z4R8 191 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 OR2L5Q8NG80 312 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 OR51L1Q8NGJ5 315 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 SLC38A5Q8WUX1 472 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 OSTF1Q92882 214 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 FBXO32Q969P5 355 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 DNAJA3Q96EY1 480 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 ZNF230Q9UIE0 474 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 CACNB4O00305 520 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 BCL2L11O43521 198 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 MTX2O75431 263 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 SLC34A2O95436 690 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 GYPBP06028 91 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 C1GALT1C1LP0DN25 315 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 ALPPL2P10696 532 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 IRF1P10914 325 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 AFF3P51826 1226 aaKnown RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 RGS8P57771 180 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 OR12D2P58182 307 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 SRSF3P84103 164 aaKnown RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 C2orf68Q2NKX9 166 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 RNF219Q5W0B1 726 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 C15orf54Q8N8G6 183 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 OR2T33Q8NG76 320 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 OR14A2Q96R54 314 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 ZNF649Q9BS31 505 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 TCEAL2Q9H3H9 227 aaPredicted RBP13.01□□□□□ -0.33
DUSP28-202ENST00000405954 C5AR2Q9P296 337 aa13.01□□□□□ -0.33
DUSP28-202ENST00000405954 WDR90Q96KV7 1748 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 ACOD1A6NK06 481 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 RPP14O95059 124 aaKnown RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 SLC25A27O95847 323 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 ACTL6AO96019 429 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 QDPRP09417 244 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 SBK2P0C263 348 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 ARAFP10398 606 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 PAX6P26367 422 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 HMGA2P52926 109 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 NFATC4Q14934 902 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 UBE2NLQ5JXB2 153 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 ATXN7L2Q5T6C5 722 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 USP50Q70EL3 339 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 TMPRSS12Q86WS5 348 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 LRRC56Q8IYG6 542 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 SAMD8Q96LT4 415 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 MMP24Q9Y5R2 645 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 NPFFR2Q9Y5X5 522 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 A0A0A6YYC8 382 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 I3L1I5 382 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 ZNF208O43345 1280 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 TIA1P31483 386 aaKnown RBP eCLIP13□□□□□ -0.33
DUSP28-202ENST00000405954 NAA10P41227 235 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 CSNK1DP48730 415 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 MEF2AQ02078 507 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 GAMTQ14353 236 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 FNDC3BQ53EP0 1204 aaKnown RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 REC114Q7Z4M0 266 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 TMEM99Q8N816 258 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 WFIKKN2Q8TEU8 576 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 BSCL2Q96G97 398 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 THOC3Q96J01 351 aaKnown RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 ATG5Q9H1Y0 275 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 SYT4Q9H2B2 425 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 EXOSC3Q9NQT5 275 aaKnown RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 A0A087WZY1 265 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 ERAL1O75616 437 aaKnown RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 OR2F2O95006 317 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 HLA-AP01891 365 aaKnown RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 AMY2AP04746 511 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 FABP4P15090 132 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 YBEYP58557 167 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 OR2F1Q13607 317 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 NKPD1Q17RQ9 610 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 EIF5AL1Q6IS14 154 aaKnown RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 MOB3CQ70IA8 216 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 C2orf73Q8N5S3 287 aaPredicted RBP13□□□□□ -0.33
DUSP28-202ENST00000405954 HIST1H2BAQ96A08 127 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 OR2M4Q96R27 311 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 SEC11CQ9BY50 192 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 LAT2Q9GZY6 243 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 RHBGQ9H310 441 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 SPTBP11277 2137 aa13□□□□□ -0.33
DUSP28-202ENST00000405954 TRAV18A0A075B6X5 111 aa12.99□□□□□ -0.33
DUSP28-202ENST00000405954 LOC390937A0A1W2PQ73 354 aa12.99□□□□□ -0.33
DUSP28-202ENST00000405954 H7C0S8 307 aa12.99□□□□□ -0.33
DUSP28-202ENST00000405954 RNASET2O00584 256 aaKnown RBP12.99□□□□□ -0.33
DUSP28-202ENST00000405954 NPC1O15118 1278 aa12.99□□□□□ -0.33
DUSP28-202ENST00000405954 RAB5AP20339 215 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms