RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PLET1Q6UQ28 207 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 C5orf46Q6UWT4 87 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 B3GNT8Q7Z7M8 397 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 SLC35F2Q8IXU6 374 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 RNASE11Q8TAA1 199 aaKnown RBP8.35□□□□□ -1.07
LIG4-202ENST00000405925 GATA6Q92908 595 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 HRASLS5Q96KN8 279 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 NMNAT3Q96T66 252 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 PIGQQ9BRB3 760 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 PLEK2Q9NYT0 353 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 CHRNA9Q9UGM1 479 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 CENPBD1B2RD01 187 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 IGLV3-19P01714 112 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 ABOP16442 354 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 ABCD3P28288 659 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 EMDP50402 254 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 RELAQ04206 551 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 ANKDD1AQ495B1 522 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 KDM4DQ6B0I6 523 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 VASNQ6EMK4 673 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 LINGO2Q7L985 606 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 BCDIN3DQ7Z5W3 292 aaKnown RBP8.35□□□□□ -1.07
LIG4-202ENST00000405925 SPARTQ8N0X7 666 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 SPACA9Q96E40 222 aaPredicted RBP8.35□□□□□ -1.07
LIG4-202ENST00000405925 SCARF2Q96GP6 870 aaPredicted RBP8.35□□□□□ -1.07
LIG4-202ENST00000405925 SGCZQ96LD1 299 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 MENTQ9BUN1 341 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 ZNF350Q9GZX5 532 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 LHPPQ9H008 270 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 SYT4Q9H2B2 425 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 TMEM138Q9NPI0 162 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 LHX9Q9NQ69 397 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 FBXO34Q9NWN3 711 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 SIRT5Q9NXA8 310 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 POLHQ9Y253 713 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 DOCK4Q8N1I0 1966 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 CDHR4A6H8M9 788 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 CCDC182A6NF36 153 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 SAGE2PA6NJ88 616 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 NPIPB8E9PQR5 432 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 F5H5K5 113 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 FOXS1O43638 330 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 IDH3BO43837 385 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 CSTBP04080 98 aaKnown RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 IGFBP1P08833 259 aaPredicted RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 CLDN6P56747 220 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 NCS1P62166 190 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 TUBA1BP68363 451 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 RAB40BQ12829 278 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 ARFRP1Q13795 201 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 CMPK2Q5EBM0 449 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 OGFOD3Q6PK18 319 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 TUBA1AQ71U36 451 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 ZNF420Q8TAQ5 688 aaPredicted RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 C10orf90Q96M02 699 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 SLC6A5Q9Y345 797 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 CKAP5Q14008 2032 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 LRRN3E7EW58 273 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 M0R082 166 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 KIAA0513O60268 411 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 CBX7O95931 251 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 RLN1P04808 185 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 PSMB10P40306 273 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 CLDN17P56750 224 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 SLC35A1P78382 337 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 EIF2B1Q14232 305 aaKnown RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 KIRREL2Q6UWL6 708 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 MEPCEQ7L2J0 689 aaKnown RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 PEG10Q86TG7 708 aaKnown RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 ZNF417Q8TAU3 575 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 THRSPQ92748 146 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 ZNF587Q96SQ5 575 aaPredicted RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 TUBA1CQ9BQE3 449 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 GALNT9Q9HCQ5 603 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 DIABLOQ9NR28 239 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 DHDHQ9UQ10 334 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 A0A1W2PNR3 127 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 CYR61O00622 381 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 MRPL33O75394 65 aaKnown RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 CD79AP11912 226 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 GADD45AP24522 165 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 SOX3P41225 446 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 BIDP55957 195 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 FOXK2Q01167 660 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 MRPL49Q13405 166 aaKnown RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 STK11Q15831 433 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 C3orf33Q6P1S2 294 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 ZNF627Q7L945 461 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 AAED1Q7RTV5 226 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 ZADH2Q8N4Q0 377 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 MS4A15Q8N5U1 240 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 TMEM105Q8N8V8 129 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 TMEM52Q8NDY8 209 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 OR5J2Q8NH18 312 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 LOXL4Q96JB6 756 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 PAK1IP1Q9NWT1 392 aaPredicted RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 MRPL39Q9NYK5 338 aaKnown RBP8.34□□□□□ -1.07
LIG4-202ENST00000405925 CHD5Q8TDI0 1954 aa8.34□□□□□ -1.07
LIG4-202ENST00000405925 J3QRK9 145 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms