RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 PPA1Q15181 289 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 OR7A5Q15622 319 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 NCMAPQ5T1S8 102 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 OTUD3Q5T2D3 398 aaPredicted RBP11.76□□□□□ -0.53
SDF4-203ENST00000403997 LRIF1Q5T3J3 769 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 GCNT6Q5T4J0 391 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 PAQR6Q6TCH4 344 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 SERPINA11Q86U17 422 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 MSRB3Q8IXL7 192 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 LRRC75A-AS1Q8N1F1 130 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 ZNF433Q8N7K0 673 aaPredicted RBP11.76□□□□□ -0.53
SDF4-203ENST00000403997 NFKBIDQ8NI38 313 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 BBS10Q8TAM1 723 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 AKAP1Q92667 903 aaKnown RBP eCLIP11.76□□□□□ -0.53
SDF4-203ENST00000403997 PERPQ96FX8 193 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 SLC52A3Q9NQ40 469 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 TMEM45AQ9NWC5 275 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 VAPAQ9P0L0 249 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.76□□□□□ -0.53
SDF4-203ENST00000403997 CHST2Q9Y4C5 530 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 RNF115Q9Y4L5 304 aa11.76□□□□□ -0.53
SDF4-203ENST00000403997 ZFHX3Q15911 3703 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 LIPT2A6NK58 231 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 A8MVM7 634 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 EVPLLA8MZ36 301 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 FRS3O43559 492 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 AKR7A3O95154 331 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 ETS2P15036 469 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 COX5AP20674 150 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 HOXC5Q00444 222 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 FAPQ12884 760 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 SLC17A1Q14916 467 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 Q5PR19 223 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 TIMM23BQ5SRD1 257 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 REEP3Q6NUK4 255 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 CASP12Q6UXS9 341 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 ATG4DQ86TL0 474 aaPredicted RBP11.75□□□□□ -0.53
SDF4-203ENST00000403997 P2RY8Q86VZ1 359 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 TMEM99Q8N816 258 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 ZNF611Q8N823 705 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 TMEM171Q8WVE6 324 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 TAPBPLQ9BX59 468 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 GSX1Q9H4S2 264 aaPredicted RBP11.75□□□□□ -0.53
SDF4-203ENST00000403997 NPHS2Q9NP85 383 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 DLL4Q9NR61 685 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 PARPBPQ9NWS1 579 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 ASB6Q9NWX5 421 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 DCTN4Q9UJW0 460 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 SLC9A8Q9Y2E8 581 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 FLVCR1Q9Y5Y0 555 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 USF3Q68DE3 2245 aa11.75□□□□□ -0.53
SDF4-203ENST00000403997 CADP27708 2225 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 A0A1W2PP18 115 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 DPRXA6NFQ7 191 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 RAD51DO75771 328 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 ARAFP10398 606 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 SLC6A2P23975 617 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 CDK6Q00534 326 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 BSPH1Q075Z2 132 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 TMEM225Q6GV28 225 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 KRT73Q86Y46 540 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 C10orf111Q8N326 155 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 LILRB1Q8NHL6 650 aaPredicted RBP11.74□□□□□ -0.53
SDF4-203ENST00000403997 C3orf49Q96BT1 292 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 SPATA5L1Q9BVQ7 753 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 CXorf56Q9H5V9 222 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 ADPRHL2Q9NX46 363 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 TAS2R16Q9NYV7 291 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 UPB1Q9UBR1 384 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 RPS6KB2Q9UBS0 482 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 LEF1Q9UJU2 399 aaPredicted RBP11.74□□□□□ -0.53
SDF4-203ENST00000403997 TRIM33Q9UPN9 1127 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 CORO2BQ9UQ03 480 aa11.74□□□□□ -0.53
SDF4-203ENST00000403997 ZNF469Q96JG9 3925 aaPredicted RBP11.74□□□□□ -0.53
SDF4-203ENST00000403997 TRBV5-3A0A0A0MS03 114 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 OR5H1A6NKK0 313 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 EDF1O60869 148 aaKnown RBP11.73□□□□□ -0.53
SDF4-203ENST00000403997 GPX2P18283 190 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 PRKAR1BP31321 381 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 PTH2RP49190 550 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 SCARB2Q14108 478 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 C9orf135Q5VTT2 229 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 C1orf140Q5VVS0 124 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 ADAM5Q6NVV9 412 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 PRSS57Q6UWY2 283 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 SEZ6L2Q6UXD5 910 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 DLEU7Q6UYE1 221 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 SSX8Q7RTT4 187 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 AAED1Q7RTV5 226 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 YTHDF3Q7Z739 585 aaKnown RBP11.73□□□□□ -0.53
SDF4-203ENST00000403997 GPAT4Q86UL3 456 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 OR9K2Q8NGE7 335 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 OR52E4Q8NGH9 312 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 OR52N5Q8NH56 324 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 STK35Q8TDR2 534 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 STON2Q8WXE9 905 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 NEUROG1Q92886 237 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 SLC35B4Q969S0 331 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms