RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 POLR3GO15318 223 aaPredicted RBP13.54□□□□□ -0.24
TPM1-207ENST00000403994 THBS1P07996 1170 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 ITGA5P08648 1049 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 NUDT7P0C024 238 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 PRG2P13727 222 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 CDH11P55287 796 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 ATP5J2P56134 94 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 STX1BP61266 288 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 SLC2A7Q6PXP3 512 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 PAQR6Q6TCH4 344 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 SSX8Q7RTT4 187 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 MUCL1Q96DR8 90 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 A4GALTQ9NPC4 353 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 SLCO1B3Q9NPD5 702 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 ASB6Q9NWX5 421 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 THUMPD1Q9NXG2 353 aaKnown RBP13.54□□□□□ -0.24
TPM1-207ENST00000403994 TAS2R16Q9NYV7 291 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 CHST2Q9Y4C5 530 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 PCDHB14Q9Y5E9 798 aa13.54□□□□□ -0.24
TPM1-207ENST00000403994 DNHD1Q96M86 4753 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 A0A1W2PP18 115 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 TMEM247A6NEH6 219 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 LIPT2A6NK58 231 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 SHISA9B4DS77 424 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 OVOL3O00110 214 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 PDLIM1O00151 329 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 FRS3O43559 492 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 MRPL33O75394 65 aaKnown RBP13.53□□□□□ -0.24
TPM1-207ENST00000403994 LY6G6DO95868 133 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 IDUAP35475 653 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 FOXG1P55316 489 aaPredicted RBP13.53□□□□□ -0.24
TPM1-207ENST00000403994 FAPQ12884 760 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 FADDQ13158 208 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 SLC17A1Q14916 467 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 LARS2Q15031 903 aaKnown RBP13.53□□□□□ -0.24
TPM1-207ENST00000403994 RGNQ15493 299 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 PGGHGQ32M88 737 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 TTMPQ5BVD1 217 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 WBP2NLQ6ICG8 309 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 SERPINA11Q86U17 422 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 MSRB3Q8IXL7 192 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 CADM2Q8N3J6 435 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 LRRC8CQ8TDW0 803 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 SMAP2Q8WU79 429 aaPredicted RBP13.53□□□□□ -0.24
TPM1-207ENST00000403994 MAL2Q969L2 176 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 NAA11Q9BSU3 229 aaPredicted RBP13.53□□□□□ -0.24
TPM1-207ENST00000403994 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
TPM1-207ENST00000403994 SONP18583 2426 aaKnown RBP13.53□□□□□ -0.24
TPM1-207ENST00000403994 A0A096LPI6 279 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 A0A0G2JPF8 293 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 CIB4A0PJX0 185 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 AQP7P3A6NL99 342 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 CCT8L1PA6NM43 557 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 TMEM229AB2RXF0 380 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 HNRNPCL2B2RXH8 293 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 HNRNPCL3B7ZW38 293 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 NR5A2O00482 541 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 ABCD4O14678 606 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 HNRNPCL1O60812 293 aaKnown RBP13.52□□□□□ -0.25
TPM1-207ENST00000403994 TGDSO95455 350 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 GPIP06744 558 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 HNRNPCL4P0DMR1 293 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 BMP2P12643 396 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 CXCR1P25024 350 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 CDKN1AP38936 164 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 COPZ1P61923 177 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 SPOCK1Q08629 439 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 BNIP2Q12982 314 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 CEACAM7Q14002 265 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 OR7A5Q15622 319 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 ZSWIM7Q19AV6 140 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 OTUD3Q5T2D3 398 aaPredicted RBP13.52□□□□□ -0.25
TPM1-207ENST00000403994 PRAMEF8Q5VWM4 474 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 PRAMEF7Q5VXH5 474 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 FUNDC1Q8IVP5 155 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 GOLGA6L1Q8N7Z2 621 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 OR52N5Q8NH56 324 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 TMEM45BQ96B21 275 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 C3orf49Q96BT1 292 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 ATP6V1G3Q96LB4 118 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 AMBRA1Q9C0C7 1298 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 RAD21L1Q9H4I0 556 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 CACYBPQ9HB71 228 aaKnown RBP13.52□□□□□ -0.25
TPM1-207ENST00000403994 SLC25A37Q9NYZ2 338 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 SLC25A15Q9Y619 301 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 CR1P17927 2039 aa13.52□□□□□ -0.25
TPM1-207ENST00000403994 A0A1W2PR80 420 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 CLIC1O00299 241 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 AKR7A3O95154 331 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 NCF2P19878 526 aaPredicted RBP13.51□□□□□ -0.25
TPM1-207ENST00000403994 IDH3AP50213 366 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 LRIF1Q5T3J3 769 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 C9orf135Q5VTT2 229 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 DTX2Q86UW9 622 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 TMEM99Q8N816 258 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 OR9K2Q8NGE7 335 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms