RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 LIX1LQ8IVB5 337 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 GCNT2Q8N0V5 402 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 CNEP1R1Q8N9A8 125 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 SLC7A6OSQ96CW6 309 aaPredicted RBP12.25□□□□□ -0.45
VPREB1-202ENST00000403807 DNAJA3Q96EY1 480 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 SLC41A3Q96GZ6 507 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 GMPPAQ96IJ6 420 aaPredicted RBP12.25□□□□□ -0.45
VPREB1-202ENST00000403807 MPP4Q96JB8 637 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 EPYCQ99645 322 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 MUC13Q9H3R2 512 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 ACTR3BQ9P1U1 418 aa12.25□□□□□ -0.45
VPREB1-202ENST00000403807 KLF2Q9Y5W3 355 aaPredicted RBP12.25□□□□□ -0.45
VPREB1-202ENST00000403807 ASH1LQ9NR48 2969 aaKnown RBP12.25□□□□□ -0.45
VPREB1-202ENST00000403807 DIDO1Q9BTC0 2240 aaKnown RBP12.25□□□□□ -0.45
VPREB1-202ENST00000403807 IGHV3-15A0A0B4J1V0 119 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 A0A1W2PNV4 684 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 LIPT2A6NK58 231 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 FAM90A27PA6NNH2 459 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 CYSRT1A8MQ03 144 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 CYTIPO60759 359 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 THRBP10828 461 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 FPR1P21462 350 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 CTBP2P56545 445 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 EGR4Q05215 589 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 RASGEF1BQ0VAM2 473 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 PIN1Q13526 163 aaPredicted RBP12.24□□□□□ -0.45
VPREB1-202ENST00000403807 OR7A5Q15622 319 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 MTX3Q5HYI7 312 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 TTC33Q6PID6 262 aaPredicted RBP12.24□□□□□ -0.45
VPREB1-202ENST00000403807 LINC00114Q6XXX2 140 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 FAM214BQ7L5A3 538 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 GDF7Q7Z4P5 450 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 DHFR2Q86XF0 187 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 MFSD8Q8NHS3 518 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 RNF128Q8TEB7 428 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 LRRC46Q96FV0 321 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 PYURFQ96I23 114 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 TMEM43Q9BTV4 400 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 UCK2Q9BZX2 261 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 AMBRA1Q9C0C7 1298 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 PIGMQ9H3S5 423 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 GP6Q9HCN6 339 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 KLHL9Q9P2J3 617 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 RIMS3Q9UJD0 308 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 SLC7A7Q9UM01 511 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 EMC9Q9Y3B6 208 aa12.24□□□□□ -0.45
VPREB1-202ENST00000403807 TRAV36DV7A0A075B6V5 113 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 A1L4Q6 167 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 SMAD9O15198 467 aaKnown RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 SS18L1O75177 396 aaPredicted RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 DNAJC8O75937 253 aaPredicted RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 PDE5AO76074 875 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 THY1P04216 161 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 YES1P07947 543 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 GTF2E2P29084 291 aaKnown RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 KIR2DL2P43627 348 aaPredicted RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 RPS5P46782 204 aaKnown RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 H3F3AP84243 136 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 ST3GAL3Q11203 375 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 MFSD13AQ14CX5 517 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 PDK3Q15120 406 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 CDSNQ15517 529 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 TMEM201Q5SNT2 666 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 PAQR6Q6TCH4 344 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 MAMDC2Q7Z304 686 aaPredicted RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 CYP4Z1Q86W10 505 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 OR6S1Q8NH40 331 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 ABHD3Q8WU67 409 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 POP5Q969H6 163 aaKnown RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 SLC25A36Q96CQ1 311 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 STARD4Q96DR4 205 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 KTI12Q96EK9 354 aaPredicted RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 CLPTM1LQ96KA5 538 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 PRRC1Q96M27 445 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 TACO1Q9BSH4 297 aaKnown RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 FNDC11Q9BVV2 318 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 CHST11Q9NPF2 352 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 CLEC4AQ9UMR7 237 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 FAM32AQ9Y421 112 aaKnown RBP12.23□□□□□ -0.45
VPREB1-202ENST00000403807 FLNCQ14315 2725 aa12.23□□□□□ -0.45
VPREB1-202ENST00000403807 NCOA6Q14686 2063 aaPredicted RBP12.22□□□□□ -0.45
VPREB1-202ENST00000403807 ARHGAP21Q5T5U3 1957 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
VPREB1-202ENST00000403807 IGKV1D-42A0A075B6H8 117 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 NKX2-6A6NCS4 301 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 PRSS44E7EML9 344 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 GSC2O15499 205 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 TNFSF13O75888 250 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 LYPD3O95274 346 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 CLDN1O95832 211 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 ITGA2P17301 1181 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 YAP1P46937 504 aaKnown RBP12.22□□□□□ -0.45
VPREB1-202ENST00000403807 SIRPAP78324 504 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 MS4A2Q01362 244 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 TRAP1Q12931 704 aaKnown RBP12.22□□□□□ -0.45
VPREB1-202ENST00000403807 GUSBP1Q15486 140 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 FAM69AQ5T7M9 428 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 TMEM225Q6GV28 225 aa12.22□□□□□ -0.45
VPREB1-202ENST00000403807 CYP2R1Q6VVX0 501 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms