RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 RAF1P04049 648 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 HNRNPCL4P0DMR1 293 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 IMPDH2P12268 514 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 NOS3P29474 1203 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 NTF4P34130 210 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ACAA2P42765 397 aaKnown RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC1A3P43003 542 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 PCYT1AP49585 367 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ATP4BP51164 291 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 POLR2HP52434 150 aaKnown RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 CSNK2A1P68400 391 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 TXNL4AP83876 142 aaKnown RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 KEAP1Q14145 624 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 SELPLGQ14242 412 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 GNA13Q14344 377 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 SQLEQ14534 574 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 LARS2Q15031 903 aaKnown RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 OCLNQ16625 522 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 LIN52Q52LA3 116 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF311Q5JNZ3 666 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 LRIF1Q5T3J3 769 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 GCNT6Q5T4J0 391 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 GTF2IRD2BQ6EKJ0 949 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ABLIM2Q6H8Q1 611 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 SPNS3Q6ZMD2 512 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 BEND4Q6ZU67 534 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ATG4DQ86TL0 474 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 SERPINA11Q86U17 422 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 GTF2IRD2Q86UP8 949 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 COMTD1Q86VU5 262 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 CCDC103Q8IW40 242 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 GABRG1Q8N1C3 465 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC43A2Q8N370 569 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 SLC25A43Q8WUT9 341 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 S100PBPQ96BU1 408 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 RAD21L1Q9H4I0 556 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF385DQ9H6B1 395 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 UBTD1Q9HAC8 227 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 BCO1Q9HAY6 547 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 A4GALTQ9NPC4 353 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF226Q9NYT6 803 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 CALML5Q9NZT1 146 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 KLHL9Q9P2J3 617 aa5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 SPIN1Q9Y657 262 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P20-201ENST00000402555 NSD1Q96L73 2696 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 A0A1W2PP18 115 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 TMEM247A6NEH6 219 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF724A8MTY0 619 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 C5orf58C9J3I9 102 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 FAAHO00519 579 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 TPST1O60507 370 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 LYZL6O75951 148 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 PGM3O95394 542 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 PMS2P2O95744 297 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 UQCRBP14927 111 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CD53P19397 219 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 PSMB1P20618 241 aaKnown RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 PTNP21246 168 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 FPR1P21462 350 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 IGHV1-2P23083 117 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 IL32P24001 234 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CXCR1P25024 350 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 AQP1P29972 269 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 ADSLP30566 484 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 MAGEA8P43361 318 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 HTR3AP46098 478 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 OR3A2P47893 321 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 FOXG1P55316 489 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 COPZ1P61923 177 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CDK6Q00534 326 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 FADDQ13158 208 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CEACAM7Q14002 265 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 SCARB2Q14108 478 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CAPRIN1Q14444 709 aaKnown RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 OR7A5Q15622 319 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 TAB1Q15750 504 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 STK11Q15831 433 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZFHX3Q15911 3703 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 DEFB113Q30KQ7 82 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 GLIPR1L2Q4G1C9 344 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 SFRP5Q5T4F7 317 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 RNF220Q5VTB9 566 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 WBP2NLQ6ICG8 309 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 CGB2Q6NT52 195 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 DLEU7Q6UYE1 221 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 BHLHA15Q7RTS1 189 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 GALNT5Q7Z7M9 940 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 DHDDSQ86SQ9 333 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 MTDHQ86UE4 582 aaKnown RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 P3H2Q8IVL5 708 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF440Q8IYI8 595 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 ZNF100Q8IYN0 542 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 BBS10Q8TAM1 723 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 PMM1Q92871 262 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 NEUROG1Q92886 237 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 NINJ1Q92982 152 aa5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 KISS1RQ969F8 398 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P20-201ENST00000402555 C3orf49Q96BT1 292 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms