RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CDH24Q86UP0 819 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 OR2L13Q8N349 312 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 LNX2Q8N448 690 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 ACOT12Q8WYK0 555 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 HSD17B8Q92506 261 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 DGAT2Q96PD7 388 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 ERVMER34-1Q9H9K5 563 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 KLK11Q9UBX7 282 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 BHLHE40O14503 412 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 ARPC1BO15143 372 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 ALX3O95076 343 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 IL9P15248 144 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 VEGFCP49767 419 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 UBE2MP61081 183 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 SIRPAP78324 504 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 EFNB1P98172 346 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 ZNF85Q03923 595 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 BIKQ13323 160 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 NFATC4Q14934 902 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 FCRL6Q6DN72 434 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 OR7G1Q8NGA0 311 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 SEC22CQ9BRL7 303 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 GINS4Q9BRT9 223 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 ADGRL4Q9HBW9 690 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 CYSLTR2Q9NS75 346 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 MED17Q9NVC6 651 aa11.66□□□□□ -0.54
PPP4R1-202ENST00000400555 NDUFB2O95178 105 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 HLA-DMAP28067 261 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 GDNFP39905 211 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 MAZP56270 477 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 CTXN1P60606 82 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 TSPAN5P62079 268 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 HHEXQ03014 270 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 ALG11Q2TAA5 492 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 YOD1Q5VVQ6 348 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 OR5M10Q6IEU7 315 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 SHISA6Q6ZSJ9 500 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 FAM220AQ7Z4H9 259 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 FAM160A2Q8N612 972 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 RCBTB1Q8NDN9 531 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 NR4A3Q92570 626 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 MSANTD3Q96H12 275 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 BMFQ96LC9 184 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 HYLS1Q96M11 299 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 MCOLN1Q9GZU1 580 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 Q9N2J8 555 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 CIB4A0PJX0 185 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 K7EQS6 105 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 TPD52L2O43399 206 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 SDC3O75056 442 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 C1QBP02746 253 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 GAS6Q14393 721 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 KIR2DS3Q14952 304 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 FTMTQ8N4E7 242 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 MOSPD2Q8NHP6 518 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 PELI1Q96FA3 418 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 TPSD1Q9BZJ3 242 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 ZNF350Q9GZX5 532 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 EXOGQ9Y2C4 368 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 TRABD2BA6NFA1 517 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 IGHA1P01876 353 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 TFP02787 698 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 NGFRP08138 427 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 UCHL1P09936 223 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 POU3F3P20264 500 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 ZMYND11Q15326 602 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 SLC25A30Q5SVS4 291 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 USP53Q70EK8 1073 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 TSEN15Q8WW01 171 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 KIAA1143Q96AT1 154 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 MARVELD1Q9BSK0 173 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 FOLH1BQ9HBA9 442 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 PRTFDC1Q9NRG1 225 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 ZMIZ1Q9ULJ6 1067 aa11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 ATXN7L1Q9ULK2 861 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1-202ENST00000400555 ANXA2P2A6NMY6 339 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 PRICKLE3O43900 615 aaPredicted RBP11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 OR6A2O95222 327 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 WNT1P04628 370 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 HIST1H2ABP04908 130 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 ANXA2P07355 339 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 OR3A3P47888 321 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 ARL4DP49703 201 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 TMEM69Q5SWH9 247 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 METAP1DQ6UB28 335 aaPredicted RBP11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 SLC35D2Q76EJ3 337 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 HIST3H2AQ7L7L0 130 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 THAP3Q8WTV1 239 aaPredicted RBP11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 C17orf50Q8WW18 174 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 ZNRF4Q8WWF5 429 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 HIST1H2ACQ93077 130 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 EVA1BQ9NVM1 165 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 KLHL21Q9UJP4 597 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 SLC6A5Q9Y345 797 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 RWDD3Q9Y3V2 267 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 C17orf51A8MQB3 221 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 GPR89AB7ZAQ6 455 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 SIX6O95475 246 aa11.64□□□□□ -0.55
PPP4R1-202ENST00000400555 APBB3O95704 486 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms